| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0157 |
|---|
| Symbol | |
|---|
| ID | 4677362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 144758 |
|---|
| End bp | 145729 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639842688 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_989772 |
|---|
| Protein GI | 121598077 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.820068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGC TCGATAACAT GCGCCTGTTC GTGCGCGTCG TCGAAGCCGG CAGTTTCACC
GCGGTCGCGA AGGAAATCGA CGCGACCACG GCCCAGGTGT CGCGCGCCGT TTCGAATCTC
GAAGCGCACG TGCAGACGCG CCTCCTGCAC CGCACGACCC GTCACCTCGG GTTGACCGAG
AGCGGCCAGC GCTACTTCGA GCGCGCGAAG TCGATCCTCG CGGAGATCGA CTATGCGAAC
GCCGAGGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGC TGCGCATCCA TGCGATGACG
GGGCTCGGGC AGAGCCACGT GGTGTCGTCG ATCGTCCGCT ATCAGGAAGA CAATCCGGAC
GTGTCGGTCG AGCTCACGCT CGCGCAGCGC ATGCCGAATC TCGTCGAGGA GGGCTACGAC
GTGTCGATCG TGTCGGCGTC GCATCTGCCC GATTCGGGCT ATGTCGCGCA GACCTGCGGG
ACGAGCTGCA GCGTGCTCGT CGCGTCGCGC GAGTATCTCG CCCGGCACGG CACGCCGACC
ACGCCCGACG ATCTCGCGAA GCACGTGTGC CTGCGGCTCG ACACGCCGGC CTCGCCGGGC
GGCGAGTGGC GGCTCGAGCG CGACGACGGC GACGAGACCG TCTACGCGCT GCCGCCCGCG
CCGTTCCAGG CGAACGTGCC GGATGCGTTG TCGGTGGCGG TGCGCGCGGG CCGCGGGATC
GGCTCGATCG CGCTGTACAC GGCGCTCGAC GACATCCGCG AAGGGCGGCT CGTGCGCGTG
CTGCCGAACT ACCGGCTCGA TACGCTGAGC GTGTACGCGG TCTATGCGAC GCGCCGCTAT
CTCGACGCGA AGATCCGCAC GTTCCTCGAC CATCTGCGCA CGACGCTCGC GCCCGCGCTC
GAAAACGATC TGAAGGAGCT CAACCGGCTG AACGGCGGCG TGGGGAAGAA GGCGCTGCGC
GAGGTCGCGT AG
|
|---|
| Protein sequence | MDMLDNMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE
SGQRYFERAK SILAEIDYAN AEARNALLRP SGKLRIHAMT GLGQSHVVSS IVRYQEDNPD
VSVELTLAQR MPNLVEEGYD VSIVSASHLP DSGYVAQTCG TSCSVLVASR EYLARHGTPT
TPDDLAKHVC LRLDTPASPG GEWRLERDDG DETVYALPPA PFQANVPDAL SVAVRAGRGI
GSIALYTALD DIREGRLVRV LPNYRLDTLS VYAVYATRRY LDAKIRTFLD HLRTTLAPAL
ENDLKELNRL NGGVGKKALR EVA
|
|---|
| |