| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0146 |
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| Symbol | |
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| ID | 4678482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 136988 |
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| End bp | 137509 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639842677 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_989761 |
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| Protein GI | 121596472 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.169169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTCG AATCGGACGT CGTCGGCTGG CTGCCGCAGT TGCGCCGCTA TGCGCGCGCG
CTGACGGGCG ACCCCGCGTG GGCCGACGAT CTCGTACAGG ACACCGTCGA GCGCGCGTTC
TCGCGCATGC GCGCGTTCCG TCCCGACAGC AATCTGCGCG CGTGGCTGTT GACGATCCTG
CGCCATCTGT ACATCGATCA GTTGCGCGCG CGCCGCGAAT TCGCCGTCGA CGACGACGAA
GGCCCGTGGC GCACGCTCGA GGCGCCCGCC GGCCAGATCG ACGCGCTCGT GCTGCGCGAC
GTGCAGCGAA TGCTGTACCG GCTGCCGCTC GAGCAGCGCG AAGTGCTGCT GCTCGTCTGC
GTCGAGGAAT TGAGCTATCA GGACGCGTCG GCGGTGCTCG GCGTGCCGGT CGGCACCGTG
ATGTCGCGGC TGTCGCGCGC GCGGGAGCGC ATGCGCGCGC TGCTGACCGA CGCGCCGCTG
CGGCCGCCGC TGTCCCTTAC CGCTGCGAGA CATCATCGAT GA
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| Protein sequence | MSFESDVVGW LPQLRRYARA LTGDPAWADD LVQDTVERAF SRMRAFRPDS NLRAWLLTIL
RHLYIDQLRA RREFAVDDDE GPWRTLEAPA GQIDALVLRD VQRMLYRLPL EQREVLLLVC
VEELSYQDAS AVLGVPVGTV MSRLSRARER MRALLTDAPL RPPLSLTAAR HHR
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