| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0135 |
|---|
| Symbol | |
|---|
| ID | 4676869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 125192 |
|---|
| End bp | 126208 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639842667 |
|---|
| Product | ABC periplasmic-binding sugar transport protein |
|---|
| Protein accession | YP_989751 |
|---|
| Protein GI | 121597781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0366053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCATGC TGTTCGCCGT CGCGCTCGCG ATCGGCGCCG CCCCCGCTTG CGCGTCGCCC
GCCGCCGGCG CTGCGCCGCC GGGGCCGCGC GCGGGCCATG CGCCGCTGTC GCTCGCCGGC
AAGCGGATCG GCATCACGGC GGCCGGCACC GATCACTACT GGGATCTGCA GGCGTACCAG
GGCGCGGTGG ACGAAGTGAA GCGCCTCGGC GGCACGCCGA TCGCGCTCGA CGCCGGCCGC
AACGACAGCC GCCAGATCGC GCAGATCCAG ACGCTGATCG CGCAACAGCC CGATGCGATC
ATCGAGCAGC TCGGCACCGC ATCCGTGCTC GAGCCGTGGC TCAGGAAAAT CCGGCAAGCG
GGCATCCCGC TTTTCACGAT CGACACCGCG TCGCCGTCGA GCCTGAACGT CGTCACGTCG
GACAATTTCG CGATCGGCTC GCAGCTCGCG CTGAAGCTCG TCAACGATAT CCGCGGCGAA
GGCAACGTCC TCGTGTTCAA CGGCTTCTAC GGCGTGCCCG TGTGCGCGAT CCGCTACGAC
CAGCTGAAAG CCGTGCTGAA GTGGTATCCG AAGGTGAAGA TCATCGAGCC CGAGCTGCGC
GACGTGATTC CGAACACGGC GCAGAACGCG TACGCGCAGA TCAGCCAGTT GCTGCAGAAG
TATCCGAAAG GCGCGATCTC GGCGATCTGG GCCGCGTGGG ACATTCCGCA GGTCGGCGCG
ACGCAGGCGG TCGACGCGGC CGGCCGACGC GAGATCCGCA CGTACGCGGT GGACGGCAGC
CCCGAGGCGG TCGCGCTCGT GAGGAATCCG ACCTCGAGCG CGGCGGCCGT CGTCGCGCAG
CAGCCGGCGC TGATCGGCCG CACCGCCGTG CGCAACGTCG CGCGCTATCT GGCGGGCGAC
CGATCGCTGC CCGCGTACAC GTTCGTGCCG TCGGTGCTCG TCACGAAGGA CGACGCGGGT
GTCGCGCGGC CTGCGCTCGG GCAGACGCCG GCCGCCGCCG GGCTCGCGCG GCGATGA
|
|---|
| Protein sequence | MSMLFAVALA IGAAPACASP AAGAAPPGPR AGHAPLSLAG KRIGITAAGT DHYWDLQAYQ
GAVDEVKRLG GTPIALDAGR NDSRQIAQIQ TLIAQQPDAI IEQLGTASVL EPWLRKIRQA
GIPLFTIDTA SPSSLNVVTS DNFAIGSQLA LKLVNDIRGE GNVLVFNGFY GVPVCAIRYD
QLKAVLKWYP KVKIIEPELR DVIPNTAQNA YAQISQLLQK YPKGAISAIW AAWDIPQVGA
TQAVDAAGRR EIRTYAVDGS PEAVALVRNP TSSAAAVVAQ QPALIGRTAV RNVARYLAGD
RSLPAYTFVP SVLVTKDDAG VARPALGQTP AAAGLARR
|
|---|
| |