| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0038 |
|---|
| Symbol | |
|---|
| ID | 4677563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 37280 |
|---|
| End bp | 38977 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639842571 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_989655 |
|---|
| Protein GI | 121596450 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCATGA AAACGCGTGA GACCCATTCC ATCGACGAGA ACAATCCCGA CTTCCCCGAC
GAAGCGGAGC TCGCCGCACT GCGCGGCTGG TACGCCGGCC TGGACACGCG TGCCGCCGTG
GCCCGCTATC TGGGCGATCG GCGAGCAGCC GGTGGGTCAT CGCGTGGCAT TCTCGGCCGC
ATTCGTCAGC GACTTGTCGC GTTCGCACGA AGCCGCCATC GCGTGGACCT GGCGGCCGCG
CTCGTTGCTC GCCCGACGAG CGCGTCGGCC GCTAGCGTCG CCCGCGTGAT CGAGGCGCTC
CGCAATCTGC CCGTGCCGGC GCCGCTGATC ACCGACGCCG TCGAGATGTG GTTGCCCCCG
CGCATCGTCC AGGCGCTGCA CGGGCACGAT ATCCGGACGC TGGCCGACCT AACCGTACGG
ATTCCGCGAC GCCGCCGCTG GTGGTCGGCG ATCGATGGTC TAGGCGTCGC CGGCGCGCGA
CATGTCGAAG CATTTTTCGC CGCGCACCCG GTGCTGACCG ACCGGGCACG CGCGTTGATC
ACCGCGACGC CGTCCGGCGT CATCGTGCCG TGGGAGCAGA TTCGTGTGCC GCATGAGGTC
GATGGCTCGC GCGGGCAGTT CCGGGCGCCA CAGGTGGCCT GCCTGCTGAG CGCGTCGAAC
GACTATGAGG CCATTCAGTC CTGGCTGTCG TTGCACGAGT CTGCCGCAAC GCAGCGTGCC
TATCGGAAAG AGGCCGAGCG GCTGATCCTG TGGGCCATTG TCGAACGCGG CCGGCCGTTG
TCGTCGCTGA CAACCGACGA TGCGATCGCC TATCGCGGTT TCTTGCGGCG ACCAACGCCA
CGCGAGCGTT GGGTCGGACC GTCGCGGCCG CGGCACAGTG TCGAATGGCG GCCGTTCAGC
GGCCCACTGT CGGCACGTTC GGCAGCGTAT GCGCTCACGG TCCTGTCGGC GATGTTCCGC
TGGCTGGTCG AGCAGCGCTA TGTGCTGGCG AATCCGTTTG CGGGCGTCAA GGTGCGCGGT
GCCGCGGCGC GTACGGGGCT GGATGTTGCC CGTGGCTTCA CCGAAGGCGA GTGGCTGTTG
ATCCGCGCAC TGGCTGACGG GCTGGAGTGG TCGTATGGCT GGGGCGCGCC GGCCGCGCAC
CGTCTGCGCT TCCTACTCGA CTTCGGTTAC GCGACCGGCC TGCGTGCCAG TGAGTTCGTC
GGCGCCACAC TCGGCGACAT CCGGCGCGAC GAACATGGTG ATCACTGGCT GCACGTGATC
GGCAAGGGCG GCAAACTCGG CAAGGTGGCG TTGCCTGCGC TGGCTCGATC CGCGCTCGAT
CAGTATCTCG TACAGCGAGG GCTGCCGGTG ACGCCGTCCC GCTGGGACCC AGCCACACCG
CTGGTCGCGA ACCTCGAGGA GGACGGCGCC GGCATCGAGA GTACACGGCT CTGGCGCGTG
CTGCGGCGCT TCTTTCGGTT TGCGGCCGAC GCGATCCAGG ATGAACGGCC CGCAACGGCC
GAGAAGCTTC GGCGCGCAAG TCCACACTGG ATGCGGCACA CACACGCGAC GCACGCGCTG
GCCCGTGGCG CCGAGCTGAT CATGGTGCGC GACAATCTCC GTCATGCGTC GATCTCGACG
ACGTCGACCT ACCTGCACGG CGATGAGATC CAGCGGGCGC GGCAGTTCGA TCAGGCATTT
GAGGCACGCA AAGTCTAG
|
|---|
| Protein sequence | MIMKTRETHS IDENNPDFPD EAELAALRGW YAGLDTRAAV ARYLGDRRAA GGSSRGILGR
IRQRLVAFAR SRHRVDLAAA LVARPTSASA ASVARVIEAL RNLPVPAPLI TDAVEMWLPP
RIVQALHGHD IRTLADLTVR IPRRRRWWSA IDGLGVAGAR HVEAFFAAHP VLTDRARALI
TATPSGVIVP WEQIRVPHEV DGSRGQFRAP QVACLLSASN DYEAIQSWLS LHESAATQRA
YRKEAERLIL WAIVERGRPL SSLTTDDAIA YRGFLRRPTP RERWVGPSRP RHSVEWRPFS
GPLSARSAAY ALTVLSAMFR WLVEQRYVLA NPFAGVKVRG AAARTGLDVA RGFTEGEWLL
IRALADGLEW SYGWGAPAAH RLRFLLDFGY ATGLRASEFV GATLGDIRRD EHGDHWLHVI
GKGGKLGKVA LPALARSALD QYLVQRGLPV TPSRWDPATP LVANLEEDGA GIESTRLWRV
LRRFFRFAAD AIQDERPATA EKLRRASPHW MRHTHATHAL ARGAELIMVR DNLRHASIST
TSTYLHGDEI QRARQFDQAF EARKV
|
|---|
| |