Gene BMASAVP1_0021 details

Gene Information

• Locus tag: BMASAVP1_0021
• ID: 4677324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 21167
• End bp: 21775
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639842554
• Product: S54 family peptidase
• Protein accession: YP_989638
• Protein GI: 121597186
• COG category: [R] General function prediction only
• COG ID: [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCG CCATCGTCGT CCTGAACGTG ATCGGTTTCC TCGTCGAGCT CGCCGCGCCC 
GAGCGCGTAC TGTCGCTGTT CGCGCTATGG CCGCCGCGCG CGGGCGCGGG CTTGCCGCCC 
GCCGCCGCAC CCGCGTTCCA TGTCTGGCAG CTCGTCACGT ACAGCGCGCT GCACGCGGGG 
CTGTCGCACC TGCTGTTCAA CATGCTCGGG CTCGTGATGT TCGGCCGCGA TGTCGAGCGC 
GCGCTCGGCC GCGCGCGCTT CGGCACGCTG TATCTCGCGA GCGTCGTATG CGGCGCGCTC 
ACGCAGCTCG CGCTCGCGCG CTATTCGGCG GCGGCCGCCG CGCCGACGAT CGGCGCGTCC 
GCCGGCGTGT TCGGCGTGCT CGCCGCGTAC GCGCTGCTGT ACCCGTCGCG CCGCGTCGTG 
CTGCTGATTC CGCCGATTCC GATGCGCGCG TGGGTGTTCG CGCTGCTCTA CGCGGGGGGC 
GAACTGCTGC TCGGCGTCGC GGGCGCGGCG AGCGGCATCG CGCATTTCGC GCATCTGGGC 
GGGATGTTCG GCGCGATCGC GCTGATGCTG GCATGGGGAC GGCCGCGCAG CGAATGGCCG 
GTTCAATGA 

 

Protein sequence

MTLAIVVLNV IGFLVELAAP ERVLSLFALW PPRAGAGLPP AAAPAFHVWQ LVTYSALHAG 
LSHLLFNMLG LVMFGRDVER ALGRARFGTL YLASVVCGAL TQLALARYSA AAAAPTIGAS 
AGVFGVLAAY ALLYPSRRVV LLIPPIPMRA WVFALLYAGG ELLLGVAGAA SGIAHFAHLG 
GMFGAIALML AWGRPRSEWP VQ