| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1338 |
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| Symbol | dapE |
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| ID | 4684198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | - |
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| Start bp | 1392461 |
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| End bp | 1393633 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639842496 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_989585 |
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| Protein GI | 121602384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade
[TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTCC TTACAGATCC TGTCCAGTTG TTACAGGCGC TTATTCGTTG TCCCTCTATT
ACGCCTAATG AAGCTGGCGC TTTATCAATT TTGGAACAGT TTTTAAGAAA AATGGGATTT
AGTGTTGAGC GTCCCATTTT TTCAGATAAA AATACAGCAG ATGTTGAAAA TTTATATGCG
AAGATGGGGA ATAAGGGGCC GCATCTTATG TTTGCTGGCC ATAGTGATGT TGTGCCACCT
GGTGAATTAG ATAATTGGAT GTATCCTCCT TTTGAGGGGA TAATTAATCA GGGTAAAATA
TATGGGCGAG GTGCTGTTGA TATGAAGGGC GCAATAGCTT GTTTTATCGC AGCACTGGCC
CGAGTTCTTG AAAAACAACC TATAAAAGGG GCTGTGAGTC TTTTGATTAC AGGCGATGAA
GAAGGTCCCG CTATTAATGG TACAGTAAAA CTTCTAAAAT GGGCAGCACA AAAAGGCGAA
AAATGGAATG CAGCCATTGT CGGTGAACCA ACAAGTGTAA AACGTGTTGG TGATATGATT
AAGATTGGTC GTCGGGGATC AATTTCTGGC ATCATTACAG TTAAAGGTCG GCAGGGACAT
GTTGCGTTTC CTGAGCGCGC GGCTAACCCA TTGCCTTTAG CACATAAACT GATTCAGGCG
TTGACAGATA CTGCTTTGGA CCAAGGAACA AAGAATTTTC AAGCAAGTAA TCTGGAATTG
ACAACTATTG ATACAGGAAA TTCTGCTACC AATATTATTC CAGCGCAAAC AGTAATTCGT
TTTAATATTC GCTACAATGA TCTTTGGACA AAGGAAGCGC TGATTGCCGA AATTGAAAAG
CGTCTTGCTT TGGTGCATTC GGAAAATAAT AGCAATCAAT ACCCCTATTA TCAGCTTGAA
TGGATACAAA ATTTAGGCAG TGTTTTCTTG ATCAAAAATG ATCACTTAAT TGAAATATTG
TCGAATGCTA TTGAAATAGT GACAGGAAAA AGACCAGAAT GTTCAACTTC TGGTGGTACT
TCCGATGCGC GGTTTATTAA AGATTACTGT CCAGTCGTTG AATTTGGTTT ACCAGGGAAC
ACGATGCATA TGGTAGACGA ATGTGTCACT CTTGATGCTA TGGAAAGCCT CACGGTTATT
TATGAACGTT TTATCATTGA TTTTTTTGCG TAA
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| Protein sequence | MPVLTDPVQL LQALIRCPSI TPNEAGALSI LEQFLRKMGF SVERPIFSDK NTADVENLYA
KMGNKGPHLM FAGHSDVVPP GELDNWMYPP FEGIINQGKI YGRGAVDMKG AIACFIAALA
RVLEKQPIKG AVSLLITGDE EGPAINGTVK LLKWAAQKGE KWNAAIVGEP TSVKRVGDMI
KIGRRGSISG IITVKGRQGH VAFPERAANP LPLAHKLIQA LTDTALDQGT KNFQASNLEL
TTIDTGNSAT NIIPAQTVIR FNIRYNDLWT KEALIAEIEK RLALVHSENN SNQYPYYQLE
WIQNLGSVFL IKNDHLIEIL SNAIEIVTGK RPECSTSGGT SDARFIKDYC PVVEFGLPGN
TMHMVDECVT LDAMESLTVI YERFIIDFFA
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