Gene BARBAKC583_1319 details

Gene Information

• Locus tag: BARBAKC583_1319
• Symbol: def
• ID: 4684713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 1371794
• End bp: 1372342
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639842478
• Product: peptide deformylase
• Protein accession: YP_989567
• Protein GI: 121602173
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 77
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAA AACCTTTAGT TATTTTACCT GACCCAATTC TCCGTGAAAT TTCAAAACCT 
GTCGAACATA TCGATTCCAC TATTCAACAA CTTGCTGATG ACATGTTAGA AACCATGTAT 
AATGCTGGAG GAATTGGCCT TGCTGCTATT CAGGTTGGTA TCCCATTGCG GATGTTAGTG 
GTAGATGTTT CCATATTTAC GAGTATTTTT GAACCAGATG CTCCTCAAGA TCCAATTATT 
GTTATTAACC CAGAAATCTT GTGGTTATCA GATGAGCGCA ATATTTGCAT GGAGGGCTGC 
CTTTCTATTC CTGGATATTC TGCAGAAGTT GAGCGCCCTA AACGCCTTTG TATTCGTTAT 
AGAAATCGCG AAGGGGAACA AAAAGAAATT GAAGCAGATA ATATTTTGGC CACTTGTCTT 
CAACACGAAA TTGATCATTT GAATGGCTGC CTCTTTATTG ATCACCTTTC AAAGGTCAAA 
CGTAATATGG TGATACGCAA ATTTGAAAAA CGGGCAAAAG AGAATAATCT AGAGAAAGAA 
ATTTTGTAA 

 

Protein sequence

MPIKPLVILP DPILREISKP VEHIDSTIQQ LADDMLETMY NAGGIGLAAI QVGIPLRMLV 
VDVSIFTSIF EPDAPQDPII VINPEILWLS DERNICMEGC LSIPGYSAEV ERPKRLCIRY 
RNREGEQKEI EADNILATCL QHEIDHLNGC LFIDHLSKVK RNMVIRKFEK RAKENNLEKE 
IL