| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1309 |
|---|
| Symbol | afeC |
|---|
| ID | 4684454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 1361633 |
|---|
| End bp | 1362490 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639842468 |
|---|
| Product | iron chelate ABC transporter, permease protein AfeC |
|---|
| Protein accession | YP_989557 |
|---|
| Protein GI | 121602630 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTT GGTTGCTTGA GCCATTTAGC TACCAATATA TGGTTAATGC AATGTGGGTT
TCAGGGTTGG TTGGGTGTGT TTGTGCTTTC CTTTCTGCTT TTCTGATGTT GAAAGGTTGG
TCTTTGATTG GGGATGCGTT ATCCCATTCG ATCGTACCTG GGGTAGCTGG AGCTTATCTT
TTAGGATTAC CTTTTTCTCT TGGTGCTTTT TTTTCTGGTG GGTTGGCTGC AGTGGTGATG
TTATTTTTTC ATCATCGAAC AAAGTTAAAA GAAGATACCA TTATTGGTTT AATTTTTTCC
TCTTTTTTTG CTCTTGGATT ATTTCTTAAG TCACTAAAAC CAATGGCTGT TAATATTAAT
ACAATTGTTC TTGGGAATAT TTTAGCAGTC AGTTTGTCAG ATATTGTACA GTTAGCTTTT
ATTAGTTTTA TTTCTCTCTT TATATTACTC TTAAAGTGGA AAGATTTATT GGTTTCTTTA
TTTGATGAAA ATCATGCACG TGCCATTGGG TTGAATGTAA AGTTGCTTAA ACTTCTCTTT
TTTACATTGC TTGCTGCTTG CACGATTGCG GCTATGCAGA CGGTTGGAGC TTTTTTGGTT
ATTTGTCTTG TGGTGACACC AGGAGCAACG GCTTATCTTT TAAGTGATCG TTTTATAAAT
CTTCTGATGA TTGCGGTGGT GATTGGAACA CTAACAAGTA TGCTTGGCGT TTATGTTAGT
TATTTTTTGA ATGCACAAAC CGGTGGTGTT GTTGTGCTTT TCCAAGCGTT TTTATTTATG
ATAGCTTTTA TTTTTTCTCC TAAATATGGT TTTATTGCTG CGCGCTTACG CATAAGAGAA
GCAAAAAAGA TGTGTTAA
|
|---|
| Protein sequence | MIAWLLEPFS YQYMVNAMWV SGLVGCVCAF LSAFLMLKGW SLIGDALSHS IVPGVAGAYL
LGLPFSLGAF FSGGLAAVVM LFFHHRTKLK EDTIIGLIFS SFFALGLFLK SLKPMAVNIN
TIVLGNILAV SLSDIVQLAF ISFISLFILL LKWKDLLVSL FDENHARAIG LNVKLLKLLF
FTLLAACTIA AMQTVGAFLV ICLVVTPGAT AYLLSDRFIN LLMIAVVIGT LTSMLGVYVS
YFLNAQTGGV VVLFQAFLFM IAFIFSPKYG FIAARLRIRE AKKMC
|
|---|
| |