Gene BARBAKC583_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_1284 
SymbolccmA 
ID4684785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp1330032 
End bp1330658 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content40% 
IMG OID639842443 
Productcytochrome c biogenesis protein CcmA 
Protein accessionYP_989533 
Protein GI121602130 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.339928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAT TGGGCAAAAA TTTAACAGCG TATAGAAATG AAAAAATTCT CTTTCAAGGC 
CTTTCTTTTT GTTTATCCAC GCAACAACTC ATGACAATCA CAGGTCCAAA TGGCATTGGA
AAATCTACAT TGCTACGAAT CATTGTCGGT CTTCTTAAAA CTTCTGAAGG TCATGTCGTG
CTTCAGGACC AAAAACAAAC ATACCCTGTA GCAGCTGCAT GCCATTATCT TAGTACCCAA
AATGCCATGA AAGCTTTTTT ATCAGTTATC GATAATCTGA AATTTTGGGC AGAATTTTAT
GGTCAAAATC TTTGCCAACC TTATGAGGCC CTTGCAGATG TTGGTCTTGC CGATCTTGGA
CATTTACCCT TCAACGTTTT ATCAACTGGT CAAAAAAGAC GCGTAGCTAT CGCTCGCCTC
TTATTATCTT ATCGCCCTAT TTGGATTTTA GATGAGCCAA TATCCGGGCT GGATAATCAT
GCTCAAGCTA TCTGCGCTAA TCTTTTTCAA CATCATCTCA ACCGAGGCGG AATGATTATA
GCGGTAACCC ATACGCCTCT TGGTCTTCCT GAAAACCATA TGATTACTCT AGAGAATTTT
TTACCTTCCC AGGAGAGAGT AGAATGA
 
Protein sequence
MMLLGKNLTA YRNEKILFQG LSFCLSTQQL MTITGPNGIG KSTLLRIIVG LLKTSEGHVV 
LQDQKQTYPV AAACHYLSTQ NAMKAFLSVI DNLKFWAEFY GQNLCQPYEA LADVGLADLG
HLPFNVLSTG QKRRVAIARL LLSYRPIWIL DEPISGLDNH AQAICANLFQ HHLNRGGMII
AVTHTPLGLP ENHMITLENF LPSQERVE