| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1256 |
|---|
| Symbol | truB |
|---|
| ID | 4683862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 1300529 |
|---|
| End bp | 1301491 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639842415 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_989505 |
|---|
| Protein GI | 121602518 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGGC AATCTAAAAA AAAAGGTCGT TCTATTTCTG GCTGGGTTAT TCTTGATAAA
CCAAAAGCAA TGAAATCAAC AGAAGCCGTC TCAAAAATCA AACGGCTCTT TAATGCACAA
AAAGCAGGAC ATGCAGGAAC ACTTGATCCG CTTGCTTCTG GTTTACTCCC TATTGCATTG
GGAGAAGCAA CCAAAACTGT TCCTTATGTT ATGGAAGGAA CAAAAACCTA CCATTTTCAT
GTAGCTTGGG GAGAAGAACG CTCTACAGAT GATCTAGAAG GAGTGGTGAC TAAAACATCC
TCTAAACGAC CAACACAGGA GGAAATCTTT GCTCTTTTAC CTAAATATAC GGGTGTTATT
TTGCAAACCC CACCACAATT CTCTGCGATC AAAATTGCCG GCAACCGTGC CTATGATCTA
GCACGTGAAG GTGAAATTTT CGAAATTCCA CCCCGCCAAG TAAAAATTGA TTCCCTTGAA
CTCATTGGAA CAACAGATCA AGGATATTCC ATCTTTGAAA TGACATGCGG AAAAGGAACC
TACGTGCGCT CCTTAGCACG CGATATGGGA CATGATCTTG GTTGTTATGG GTATATTGCT
GATTTACGCC GTACTGCAGT CGCGCCTTTT TGTGAAAATG ATCTCATTAC ATGGGATGCA
TTAAAAGCTG CAATACCACA CGAAAACACA ACAGATGAAA ATTGTATACC TCTCAAGCAA
AATTTCTCTA CACTTGATGG ATTATTAATT GAAACAGATG TTGCATTAAA GTGTCTTGCT
CATTATACCC TTAACCAAAT TCAAGCACAG CGTGTTAGAA TGGGAAATTC AATCCTCTTA
TGTGATCAAA ACATGCCAAC GAGTAATATT GATATCTGTG TAACCTATAA AGCCCAACTG
CTTGCTATAG GCACTATTGA TCAAAATCAA TTCAAGCCAA AACGAATTTT TACTACTTTA
TAA
|
|---|
| Protein sequence | MSRQSKKKGR SISGWVILDK PKAMKSTEAV SKIKRLFNAQ KAGHAGTLDP LASGLLPIAL
GEATKTVPYV MEGTKTYHFH VAWGEERSTD DLEGVVTKTS SKRPTQEEIF ALLPKYTGVI
LQTPPQFSAI KIAGNRAYDL AREGEIFEIP PRQVKIDSLE LIGTTDQGYS IFEMTCGKGT
YVRSLARDMG HDLGCYGYIA DLRRTAVAPF CENDLITWDA LKAAIPHENT TDENCIPLKQ
NFSTLDGLLI ETDVALKCLA HYTLNQIQAQ RVRMGNSILL CDQNMPTSNI DICVTYKAQL
LAIGTIDQNQ FKPKRIFTTL
|
|---|
| |