| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1200 |
|---|
| Symbol | dcd |
|---|
| ID | 4684990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 1241514 |
|---|
| End bp | 1242617 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639842363 |
|---|
| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
|---|
| Protein accession | YP_989453 |
|---|
| Protein GI | 121601664 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 0.811459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA AATATATGAT GCGTACAAAT GGCATTCTTG CAGATAGTGA TATAAAAGCC
TTAATTGATA ATGGCGTTCT TCAATCTATA AGCACGTTTG ATACGGATCA AATACAACCC
GCAAGTCTTG ATTTACGTTT AGGAAATAAA GCCTATCGTG TACGTGCTTC CTTTATGCCA
GGACCTGATA CACAAGTTTT TGATAAGCTT GAACGATTAA AGTTGCATGA GTTTGATTTG
CGAGACGGAG CAGTTTTAGA AACGGGTTGT GTTTATATCG TTCCTCTTTT GGAAAGTTTA
GCTTTACCAC AAATGTTGGC TGCGGTGGCG AACCCTAAAA GCTCGACAGG ACGGCTAGAT
ATTTTTACAC GTGTAATCAC TGATAATGCT CAGGAATTTG ATAAAATTGG TGCAGGTTAT
CATGGTCAAC TTTATCTTGA AATTAGTCCA CGGACATTTC CGATTTTGGT ACGTACAGGT
TCGCGTTTAT CACAACTTCG ATTTCGGAAG GGGAAAAGTT GTTTAAATGA AGTTGAATTG
TACACTTTGC ACAAAAATGA AACACTTATA TCGGATGATG TTCCCAACAT TAGTGATGGA
GGTGTTGCAC TCTCCATTAA TTTGAAGGGA GATAAAAATG GGTTTGTGGG GTATCGTGGT
AAACGTCATA CGAGTGTCAT TGATGTTGAT AAACGCGCTG TTGCTAATGT TTTAGATTTT
TGGGAACCTC TTTATGATCA TGGTCAAAAA GAACTTGTTC TTGATCCTGA CGAGTTTTAT
ATTTTAGCAT CACGAGAAGC TATCCATATT CCTCCACTTT ATGCAGCTGA AATGACACCA
TTCGATCCTT TAGTTGGTGA ATTCAGAGTG CATTATGCCG GTTTTTTTGA TCCAGGATTT
GGGCATATGG AAGCGGGTGG AAAAGGGGCA AGGGTAGTTT TGGAAGTGCG TAATCATGAA
GTTCCATTTA TTTTAGAACA TGGTCAAATT ATTGGGCGTT TGGTGTATGA GCATATGCTA
AATAGACCAT CAGCACTTTA TGGTCATGAT ATTGGTTCAC ATTATCAAGC ACAGGGATTA
AAACTGTCCA AGCATTTTAA ATGA
|
|---|
| Protein sequence | MESKYMMRTN GILADSDIKA LIDNGVLQSI STFDTDQIQP ASLDLRLGNK AYRVRASFMP
GPDTQVFDKL ERLKLHEFDL RDGAVLETGC VYIVPLLESL ALPQMLAAVA NPKSSTGRLD
IFTRVITDNA QEFDKIGAGY HGQLYLEISP RTFPILVRTG SRLSQLRFRK GKSCLNEVEL
YTLHKNETLI SDDVPNISDG GVALSINLKG DKNGFVGYRG KRHTSVIDVD KRAVANVLDF
WEPLYDHGQK ELVLDPDEFY ILASREAIHI PPLYAAEMTP FDPLVGEFRV HYAGFFDPGF
GHMEAGGKGA RVVLEVRNHE VPFILEHGQI IGRLVYEHML NRPSALYGHD IGSHYQAQGL
KLSKHFK
|
|---|
| |