| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1159 |
|---|
| Symbol | fliR |
|---|
| ID | 4684267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 1198598 |
|---|
| End bp | 1199395 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639842327 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_989418 |
|---|
| Protein GI | 121602553 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGA CATCCTTATC CTCACTTATA TCGCCATTGG CTTCTGTACC TTTGAACCAG
TTGGTTCTTC TTGCCATGCT TGTTTTTGCG CGAGTGGGGG CTTGTTTGAT GTTGATGCCA
GGTGTTTCAA GTATTCGTAT TCCTGTCCAG GTACGTTTAT TTATCGCGGT TTCTTTTTCA
TTGATTATAT TGCCTATGGT GGCTGATTTT TTTAAGGATT TTGGCGAAAA ACCTGATTTT
GCCTTATTTG TGCGTGCTTT ATGTTCTGAA ATGCTGATTG GGGTTACTTT TGGGGTTATT
GCCCATGTTT ATCTGTGGGC TTTGCAATTT ATGGCGACGA TTATTGCCAT GTCGATGGGA
TATTCTGGTC AACCAGGCCA TAATGTGATT GACTCAACAC CAGAAACTCA AATAGCGCAT
CTGCTGGTTT TGGTTGGTGT TATGCTTTTT TTTGCAAGCG ATTTGCACAT GTTTGCGATC
CGCGGTCTCT TGGCTTCTTA TGATGTGGTA TCGCCAGTTT TTATTCCTAA TCCAGAGGCT
GCATTGATAG ATTATCGTGA TGCTTTGTCG AAGGCCTTTC TAACGACATT GCGTATTGCT
GCACCTTTTA TTGTTTATGC GGTTTTGGTC AATATTGCTG TTGGATTGGT CAATAAATTA
ACCCCCAACA TTCCTGTATA TTTTATTTCA CTGCCTTTTG TGGTCGCAGG GGGATTATTT
TTGCTTTACT TTATTATGCC GGAGATTTTG AATTTTTTCA GTTTAGAGTC ACAAGACTGG
CTGAGGAGAG GGCCTTAA
|
|---|
| Protein sequence | MPLTSLSSLI SPLASVPLNQ LVLLAMLVFA RVGACLMLMP GVSSIRIPVQ VRLFIAVSFS
LIILPMVADF FKDFGEKPDF ALFVRALCSE MLIGVTFGVI AHVYLWALQF MATIIAMSMG
YSGQPGHNVI DSTPETQIAH LLVLVGVMLF FASDLHMFAI RGLLASYDVV SPVFIPNPEA
ALIDYRDALS KAFLTTLRIA APFIVYAVLV NIAVGLVNKL TPNIPVYFIS LPFVVAGGLF
LLYFIMPEIL NFFSLESQDW LRRGP
|
|---|
| |