Gene BARBAKC583_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_1089 
Symbol 
ID4684645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp1116549 
End bp1118126 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content38% 
IMG OID639842259 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_989351 
Protein GI121601825 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value0.831472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CTACCCCTTC TTCTTCCGAT GTTGATGTCC AAGAACGCAT AGGAATGCGT 
AAAATCGTAG CTTTTATTGC TATGACTGTT GGCATGTTTA TGGCTATTTT GGATATCCAA
ATTGTTTCCT CATCTTTAGC TGAAATTCAA GCTGGTCTTT CAGCAAGCTC TAATGAAATT
TCATGGGTTC AAACCTCCTA TCTCATTGCA GAAGTCATTA TGTTACCCCT TTCTGGCTTT
TTAGGGCGTT TACTTTCAAC ACGGGTTTTA TTCAGTGTAT CAGCCGCTGG ATTTACTATT
GCCTCCATCC TTTGTGCAAC AGCAACATCT ATTGAACAGA TGATTGTTTA TCGAGCACTC
CAAGGCTTTA TCGGTGGAGG CATTATTCCT TGTGTTTTTG TTGCTTCCTA TATCATGTTT
CCTCCTTCGA AACGTCCAAT TATTTCACCG ATCATTGGAC TGGTTGCAAC ATTAGCACCC
ACCATTGGTC CAACAGTGGG AGGATATGTC AGCCACGCCT TATCATGGCA TTGGCTCTTT
CTTATCAATG TACCCTTTGG AATCATTATT TCAATTTTAG CTTGGAAATT GATTGATTTT
GATAAAGCAG ATCCGTCTCT ATTGGCTAAA TTTGACTGGT GGGGACTTAT TTCTATGGCA
CTCTTCCTGG GATCTTTAGA ATATGTTTTA GAAGAGGGAG CACATCGTGA TTGGTTCAAT
GATAATTTAG TATTTAGCTT TTTTATTATT ATGGTTTTAT CTGCTAGTGT ATTCTTTTGG
CGTGTTTTTA ATGTAAAAGA ACCAATTGTT GATCTTACTG CTTTTTCCAA TTTTAATTTT
TCAATCTCTA CTATATTTGC CTTTATGCTT GGAATAGGCC TCTATGGCCT TACTTATTTA
TATCCTGTCT ATTTAAGTCA AATTCGTCAT TATGATGCAC TCATGATTGG AAAAACGCTG
TTTATTTCAG GTTTGGCTAT GTTTTTTACT GCTCCTCTTT CTGGATTTCT TTCAGCACGA
ATCGATCCAC GTATTATGAT AGCTGTAGGA TTTGCTGGCT TTGCATGGGG AACTTGGCTT
GCTACCTCAA TCACAGATGA TTGGGGATTC TGGGAACTTT TGTGGCCTCA AATTCTTCGC
GGTAGTTCTA TGATGTTATG CATGGTTCCT ATCAATAACA TTGCTTTTGG ATCCTTATCA
CCAGAACGGA TGAAAAATGC TTCTGGGATT TTTAATTTAA TGCGAAATCT TGGCGGTGCA
GTAGGCCTTG CTATTATTAG CACTCTTATA ACACAACGGA CTAATCTCCA TTATGAACGC
ATAGCTGAAG CCGTCCAACC TGGAAATATC CAAGCGACTG AAACACTTGC AAGCTTTACT
AAACTTTTCA GCTTTTCTAC TTTTGATCCA CAAGCTCTTG CTTTAGTTCA ACTTTTTAAT
ATGGTTTACA CACAAGCTGC AGTCATGGCT TTTAGTGATC TCTTTTTTAT GATATTTTTT
CTCTTTAGTA TCTTAACTTT CTTAACTTTT TTTCTCAAAA AAATACCGCC ATCCACCAAT
ATCCGCGCAG AGCACTGA
 
Protein sequence
MKNSTPSSSD VDVQERIGMR KIVAFIAMTV GMFMAILDIQ IVSSSLAEIQ AGLSASSNEI 
SWVQTSYLIA EVIMLPLSGF LGRLLSTRVL FSVSAAGFTI ASILCATATS IEQMIVYRAL
QGFIGGGIIP CVFVASYIMF PPSKRPIISP IIGLVATLAP TIGPTVGGYV SHALSWHWLF
LINVPFGIII SILAWKLIDF DKADPSLLAK FDWWGLISMA LFLGSLEYVL EEGAHRDWFN
DNLVFSFFII MVLSASVFFW RVFNVKEPIV DLTAFSNFNF SISTIFAFML GIGLYGLTYL
YPVYLSQIRH YDALMIGKTL FISGLAMFFT APLSGFLSAR IDPRIMIAVG FAGFAWGTWL
ATSITDDWGF WELLWPQILR GSSMMLCMVP INNIAFGSLS PERMKNASGI FNLMRNLGGA
VGLAIISTLI TQRTNLHYER IAEAVQPGNI QATETLASFT KLFSFSTFDP QALALVQLFN
MVYTQAAVMA FSDLFFMIFF LFSILTFLTF FLKKIPPSTN IRAEH