| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1049 |
|---|
| Symbol | engB |
|---|
| ID | 4683887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 1085407 |
|---|
| End bp | 1086054 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639842225 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_989324 |
|---|
| Protein GI | 121602307 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.0113767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAT GTTCTGCATT TTCTGGAATT TTTTTTCGTA ATTGGATTTT CATTCGTGGT
GTTCCCACAA TACAATTTCT TCCACCTGAA GGGCCACCAG AAATCGCATT TGCAGGACGT
TCCAATGTTG GAAAATCTTC TTTAATCAAT GCGCTTGTAC AGCAAAAAGG GCTAGCACGC
ACTTCAAATA CACCAGGACG AACACAAGAA CTCAACTATT TTGTTCCTGA CGGTTTCAGT
GGCTCAAAAG AAGACTTTCC TCCTATGGCA TTAGTAGATA TGCCGGGTTA TGGTTTTGCA
CAAGCCCCAA AAAATCTCGT TGATGCATGG ACACATCTGG TTTTTAACTA TTTACGAGGT
CGTACAACAC TGAAACGTGT TTATATTTTA ATTGATTCAC GTCACGGAAT TAAAAAAAAT
GATGAAGAGG TTCTCGATCT ACTTGATAAA GCAGCTGTTT CTTACCAAAT TATTCTAACA
AAGAGTGATA AAATAAAATC GAATATGCTG GAAAACTTAA TGACAACTAC ACAAATGAGC
CTTCTTAAAC GTCCTGCTGC TTATCCTGAA TTGCTTACCA CCTCTGCGGA AAAAGCCTTA
GGTTTGGAAG AATTGCGTAC GGCTATTTTG CAAGCAGTTG TGCAATAA
|
|---|
| Protein sequence | MTQCSAFSGI FFRNWIFIRG VPTIQFLPPE GPPEIAFAGR SNVGKSSLIN ALVQQKGLAR
TSNTPGRTQE LNYFVPDGFS GSKEDFPPMA LVDMPGYGFA QAPKNLVDAW THLVFNYLRG
RTTLKRVYIL IDSRHGIKKN DEEVLDLLDK AAVSYQIILT KSDKIKSNML ENLMTTTQMS
LLKRPAAYPE LLTTSAEKAL GLEELRTAIL QAVVQ
|
|---|
| |