Gene BARBAKC583_1048 details

Gene Information

• Locus tag: BARBAKC583_1048
• ID: 4684661
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 1083572
• End bp: 1085410
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 639842224
• Product: putative inner membrane protein translocase component YidC
• Protein accession: YP_989323
• Protein GI: 121602508
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.0029293
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATATA ATCGTAATTT CTTTATCGCC ATTGGATTAT CTCTTATCAT TTTTGTTGCG 
TGGCATTTTT TGTATATTGT TCCTCAACAT GAAAATCTGA AAAACGCGCA GACTATTGAA 
CAACAAGCGT TAAAACAAAA TCCAGCATCG CCAACTTATG ATGCGGATTT TTCTAATAAT 
GCACAAACAA ATCAATCGAG GCTGACAGCC GATCGTTCAA TGACACCTGA AATACGTCGT 
GCAGAATTGG CAAAAACAGA TCGTATTACA ATTAAAACTG ATGAACTTGA AGGTTCCATT 
AATCTTGTTG GAGCTCAATT TGATGATCTT TTTCTCAAAA AATATCACCT AACGGTTGAC 
AAAACATCGC CTCAAATTTC TTTATTGAAT CCCAACGGTT TCAAAACATC CTACCTTGCT 
GAATTTGGTT TTACGAGCTC ATCCTTACCA GAAAAAGCCT TGCCACAATC AAATACACAA 
TGGCAGATAG AAAGTGAAAA TACGATCCTT ACTCCTTCAA CGCCTGTTAC TTTGGTCTAC 
AATAATGGGC AAGGACAAAT TTTCCGTCGA ACCATTTCTA TTGACGATCA TTACATGTTC 
ACCATTGAGG ATTCTATCAA TAACGAGAGT GACAATCCAG TACATCTTTC ATCTTACGCT 
CGAGTTGCAC GTGCTGCTCC ACCAGAACAC GCACAAGCAA CCTATTTGCT CCATGAAGGT 
ATGATTGGCA TTGCTGGTAA TTCACTTAAA ACTGAAACAT ATGAAGCCTT ATCGGAACTT 
ACCCTTAATC CTGAAGATGG TCAGAAAAGC TTAACTTTCC AGAAAGTTAC AGGAGGCTGG 
ATTGGTATAA CTGATAAATA TTGGGCTGTA GCGGTCATTC CCTCACAAAA TCAGGAATAT 
ACAAGTCGCT TTGTTTATTT TGATCGATTG AACACCCATT ATCAATCTGA TTTGCAGAGT 
GCACTTTTAA GCATTGCTCC TCGTGAAACA AAAACCATAA TCAATTATCT TTTTGCCGGT 
GCAAAACGCG TTGAAATCAT TAATCAATAT CAAAATCAGC TACAAATTAA GAAATTTGGC 
CTCTTAATCG ATTGGGGTTG GTTTGATTTT ATTACCAAAC CAATGTTTTC CCTCATTCAT 
ATTCTCTACG AACAAACAGG CAATTTTGGT ATCGCTATTC TTCTCACCAC GGTTCTTTTG 
AAAACACTTC TATTCCCGCT TGCTAATAAA TCCTACATAT CTATGGCACG CATGAAAATC 
ATACAGCCAA TGATGCAAGA AATTAAGGAG AAATATGCAG AAGATCGAGT CAAACAACAA 
CACGCAATAA TACAATTATA TAAAACGCAA AAAATCAATC CCCTGGCAGG TTGCTTGCCA 
ATGCTTATTC AGTTCCCAAT ATTTTTTGCC CTTTATAAGG TTCTTTATAT TACCCTTGAA 
ATGCGGCATG CACCTTTCTT TGGCTGGATT CAGGATTTAG CCGCTCCTGA TCCAACATCT 
ATTTTTAACC TATTTGGCTT CCTACCTTAT GCAGTACCAG CATTTTTTGT AATTGGTGCG 
TGGCCTTTAG TTATGGGAAT AACAATGTTT CTACAAATGC AGATGAACCC ACCTCCTGTA 
GATCCTATAC AAGCTACACT TTTTGCATGG CTGCCAATTA TCTTTACGTT TATGCTAGCA 
TCTTTTCCTG CAGGTCTTGT CATCTATTGG GCATGGAACA ATACATTGTC GATTATTCAA 
CAAAGTATTA TCATGAAACG TCAAGGTGTG AAAATTGAAC TTTTTAATAA TATTAAAACT 
ATTTGGCAAA AAGCACCTAA AAAAGAAGTG CATAAATGA 

 

Protein sequence

MEYNRNFFIA IGLSLIIFVA WHFLYIVPQH ENLKNAQTIE QQALKQNPAS PTYDADFSNN 
AQTNQSRLTA DRSMTPEIRR AELAKTDRIT IKTDELEGSI NLVGAQFDDL FLKKYHLTVD 
KTSPQISLLN PNGFKTSYLA EFGFTSSSLP EKALPQSNTQ WQIESENTIL TPSTPVTLVY 
NNGQGQIFRR TISIDDHYMF TIEDSINNES DNPVHLSSYA RVARAAPPEH AQATYLLHEG 
MIGIAGNSLK TETYEALSEL TLNPEDGQKS LTFQKVTGGW IGITDKYWAV AVIPSQNQEY 
TSRFVYFDRL NTHYQSDLQS ALLSIAPRET KTIINYLFAG AKRVEIINQY QNQLQIKKFG 
LLIDWGWFDF ITKPMFSLIH ILYEQTGNFG IAILLTTVLL KTLLFPLANK SYISMARMKI 
IQPMMQEIKE KYAEDRVKQQ HAIIQLYKTQ KINPLAGCLP MLIQFPIFFA LYKVLYITLE 
MRHAPFFGWI QDLAAPDPTS IFNLFGFLPY AVPAFFVIGA WPLVMGITMF LQMQMNPPPV 
DPIQATLFAW LPIIFTFMLA SFPAGLVIYW AWNNTLSIIQ QSIIMKRQGV KIELFNNIKT 
IWQKAPKKEV HK