Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0916 |
Symbol | cycA |
ID | 4684946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 941025 |
End bp | 942425 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639842098 |
Product | D-serine/D-alanine/glycine transporter |
Protein accession | YP_989199 |
Protein GI | 121602222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.104508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACA AACGAAATTT AGATGAAGGG CATAAAAGAA AATTGCAACG TGGTTTAGAT AATCGCCATG TGCAACTTAT CGCTATTAGT GGTGCTATTG GCACAGGTCT TTTTATGGGC TCAGGGAAAA CAATCAGTGT TGCTGGTCCT TCAATTATAT TAGTTTACTC TATTATTGGT TGTGTTTTAT ATTTCATAAT GCGGGCCATG GGAGAGCTGC TGCTTTCTAA TACGCAATAT CGGTCTTTTA TCGACTTTTC AGCTGATTTA TTGGGACCAA GCGCTGGTTT TTTTATTGGC TGGACTTACT GGTTGTGCTG GATTGTAACC GGAACCGCAG ATATTATTGC TATTGTCAAT TATACGCAAT TTTGGTGGCA TGAACTCAAC CCCTGGATCC CTGCTCTTAT CTGTATCTTT TTCTTTTTAG TATTTAACCT TGTAGCAGTT AAACTATTTG GTGAGCTTGA ATTTTGGTTT GGTCTCATTA AAATTGCAGC AATTTTAGTA TTAGTCTTTG TTGGATTATA TATGATCCTT GTTGGCTTTA CCTCTCCCAA TGGGACTATC TCCTCTTTTA ATCATGTATG GAACAATGGA GATATTTTCC CTCGAGGTAT GATGGGATTT TTTGCGGGTT TTCAGATTGC TATTTTTTCT TTCGTTGGTA TTGAACTTGC TGGTACAGCA GCAGCTGAGG TAAAAGAGCC TGAAACAGTC TTGCCAAAAG CAATCAATTC AATCCCTATA CGTATCGTAT TCTTTTATAT TGTTTCTCTC ATTGTGATTA TGTCAGTCAC ACCTTGGAAT CAAATTATGC CACATAAAAG CCCATTTGTA GAAATGTTTC TGCTTATTGG TATCCCAATT GCTGCTGGCT TAGTTAATTT TGTTGTTTTA ACATCAGCAG CATCTTCAGC AAATAGTGGT GTTTTTTCTA CTAGTCGTAT GATATATGGA CTTGCTATTA AACGAGGAGC GCCTAGCTTT TTAGGAAAGC TTTCCAATAA CTCTATTCCT TCTAATGCAT TACTCTTTTC TTGCTTATGC ATTTTACTAG GATATACAAT TTTATCATTA TCCCCAACAA TCATAGATGC GTTTACAATC GTCACTACCA TTTCAGCAGT TTTATTCATG TTTGTATGGT CTTTAATTTT GGTCAGCTAC ATTGTCTACC GTCGTAACCG CCCTACACAA CATGCTATGT CAATCTATAA AATGCCAGGA GGCGTTTTTG TTTGCTGGGG TATTCTGGCC TTCTTTGCGT TTATCGTCTT TTTATTGACA TTAGAACCCG ATACCTTAAT CGCTCTAAAA TATACCCCAT TATGGTTTGT TTTTTTGGGT ATCGTATATT TCATGTTTGG AAATAAGAGT TTTAGTTCAC ACAAAAAATG A
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Protein sequence | MDHKRNLDEG HKRKLQRGLD NRHVQLIAIS GAIGTGLFMG SGKTISVAGP SIILVYSIIG CVLYFIMRAM GELLLSNTQY RSFIDFSADL LGPSAGFFIG WTYWLCWIVT GTADIIAIVN YTQFWWHELN PWIPALICIF FFLVFNLVAV KLFGELEFWF GLIKIAAILV LVFVGLYMIL VGFTSPNGTI SSFNHVWNNG DIFPRGMMGF FAGFQIAIFS FVGIELAGTA AAEVKEPETV LPKAINSIPI RIVFFYIVSL IVIMSVTPWN QIMPHKSPFV EMFLLIGIPI AAGLVNFVVL TSAASSANSG VFSTSRMIYG LAIKRGAPSF LGKLSNNSIP SNALLFSCLC ILLGYTILSL SPTIIDAFTI VTTISAVLFM FVWSLILVSY IVYRRNRPTQ HAMSIYKMPG GVFVCWGILA FFAFIVFLLT LEPDTLIALK YTPLWFVFLG IVYFMFGNKS FSSHKK
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