| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0878 |
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| Symbol | secDF |
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| ID | 4684180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 904896 |
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| End bp | 907400 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639842061 |
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| Product | bifunctional preprotein translocase subunit SecD/SecF |
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| Protein accession | YP_989164 |
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| Protein GI | 121602716 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF
[COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.335263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAC CCCGCTGGCT TACTACTCTC TATTGTCTTA TTCTCTTAAG CGGCATTTAC
GTCGCACTGC CCAACTTATT TTCACAAGAA CAAATCGAAA ATTCAAAATT CCTACCAAAT
ACCCAAGTAA CACTTGGACT TGACCTTCAA GGAGGGTCCT CTCTTCTTCT TGAAGTCGAT
GCAAAAACAT TAAAGCGTGA TCAATTACAA ACGGTTTTAA ACAATGTACG TGCAAAATTA
CGCGAAAAAA AAATTCGCAC ATCAAGTATT CGCATAATCG AAAATAACGT AGTAGCTGTT
CTTTCTGACC TTACGAAAAA TCAAGAAGCC ATTACTGCTT TAAAAACACT CATTACGCCT
ATAAACAACA GCTTTGGCGT TACAACGAAT AATATCTCTA TCCATGCTCA AAATGAAACG
ATTCATGTGA CATTAACTGA AGCTGCTATA AAGGATCGCA TCAGTAATGC TATAGAACAA
AGCTTAGAAA TCATCCGTCG TCGTATTGAT CAAGTCGGTG TTACTGAACC AGCTATCCAA
AAAGTAGGAA CAGATCGTAT TATGGTCCAA TTACCTGGAC TACAAGACCC AAAGCAGCTG
CGCGATCTTT TAGGCACGAC CGCAAAAATG ACCTTCCATC TTGTCCCCGC AAACGTAGAT
CTTAACAACC CACCCGCAGG TGTATCAATT CTTCCTGGAT ATAACAATGA AAATCAACGT
TATGCAATTT ACGACCAAGT TGCTTTAGAT GGCAATGTTC TTAAAGATGC CCGCGCAGGT
TTTGATCCAC AAATACCAGG ACGTTCTATA ATCTCCTTCA CCATGAATTC CATTGGCTCG
AGAATATTTG CAGAAATAAC ACGCCAAAAT ATCAACCGCC CCTTTGCAAT TGTTCTTGAT
AGCAAAGTTT TGACTGCTCC CATCATTAAT GGCGTCATTC CCAATGGACA AGGTCAAATT
ACAGGAAATT TTGACCCCAA AGAAGCCTCT ACTCTTGCAG CTCTTCTTCG TGCTGGCTCT
TTACCTGCAC CACTCACTGT TATTGAAGAA AGAACTGTAG GTCCTAATCT TGGTGCAGAT
GCTATTAAAA TGGGGCTTTA TACGGGAATC ATAGGTTTTA TTCTCGTTGC AATTTTCATT
TTTTTTCTAT ACGGAATTTG GGGAATTATT GCTGATATAG CACTAGCACT ACATACTATT
TTGACATTCG CTGCATTAAG CCTTCTTGGT GCTACACTTA CACTTCCAGG CATTGCTGGT
ATTATTTTAG GTATAGGTAT CGCTGTTGAT GCCAATATCC TCATTAACGA ACGTATCCGA
GAAGAAAGCC GAAAAGGGCT CAGTGCTTTT GCTGCTCTAG ATCGTGGCTT TAAACAAGCT
TTTACAACGA TTATTGATGC TAACGTCACT GCTGTTATTG CAACCATTTT GCTTTTTTTG
TTTGGTACTG GGCCCGTCCG TGGTTTCGCT GTAACAATGT TGCTTGGTGT TGTTATCTCT
ATGTTTACTG ATATCACCCT AGTGCGCATG ATTATGATTT GGATAATCCG TAAATGGAAA
ATAAAAATAT TGCACATTCA GCCTTTTTTC AATTTTATTC CTCAAAATAC AACTTTCCGT
TTTATGAATG CTCGCTTCAT TGGCATTGGT GTTTCATTTA TTTTATCACT ATCTTCCATT
TTTTTGTTCT TTAAACCAGG TTTAAATTTC GGCATTGATT TTATTGGTGG AAGCCAGATG
AGTATTACAA CATCAACACC AGCAAATTTG GCAATCTTGC GATCACAGCT ATCTACCCTT
AACATCGGTG AAGTGACGCT ACAAAATATT GATAATGAAA ATGCAGTACT CATTCGTATC
CCGAAACAAA ATGGTGATGA AATACAGCAA ACTATAGCTA TTGATAAAGT CAAAACCACC
GTAAAAGATA TTTACCCGGA TGCTGCATTT GATCAAATAG AGGTCGTTGG TCCAAAAGTT
TCAGGTGAAC TCGCTATTGC TGGTATTACA GCTGTCATTT TAGCAGCAAT TGCTATGTCA
CTTTATATCT GGTGGCGCTT CGAATGGTTC TTCGCAGCAG GAGCCATTAT TACGCTTATC
CTTGATACTA CGAAAATGGT TGGTTTTTTT GCTCTATGTC AATTTGATTT CAATTTAACC
GCTATTGCCG CTCTTTTAAC GATTGTTGGC TATTCCATTA ATGACAAAGT CGTTGTCTAT
GATCGCATGC GTGAAAATAT GCGCCTCTAC AGAACAAAGC CACTGCGTGA AATCATTGAT
CTCTCAATCA ATCAAGTTCT TGTACGTTGT ATCTTTACAT CAGCAACGAC GGTACTTGCT
ATGTTACCTA TGGCGATATG GGGAGGAAGT ACTGTCCAAA ATTTTGCAAT ACCTATGGTC
GCTGGAGTTC TTATTGCAAC ATCATCTTCT ATCTTTATCG CAACTCCCAT TCTATTGTTG
TTAGGTAATT GGTGGCATAA CCATAATAAA GAAACTCAAA TATAA
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| Protein sequence | MRTPRWLTTL YCLILLSGIY VALPNLFSQE QIENSKFLPN TQVTLGLDLQ GGSSLLLEVD
AKTLKRDQLQ TVLNNVRAKL REKKIRTSSI RIIENNVVAV LSDLTKNQEA ITALKTLITP
INNSFGVTTN NISIHAQNET IHVTLTEAAI KDRISNAIEQ SLEIIRRRID QVGVTEPAIQ
KVGTDRIMVQ LPGLQDPKQL RDLLGTTAKM TFHLVPANVD LNNPPAGVSI LPGYNNENQR
YAIYDQVALD GNVLKDARAG FDPQIPGRSI ISFTMNSIGS RIFAEITRQN INRPFAIVLD
SKVLTAPIIN GVIPNGQGQI TGNFDPKEAS TLAALLRAGS LPAPLTVIEE RTVGPNLGAD
AIKMGLYTGI IGFILVAIFI FFLYGIWGII ADIALALHTI LTFAALSLLG ATLTLPGIAG
IILGIGIAVD ANILINERIR EESRKGLSAF AALDRGFKQA FTTIIDANVT AVIATILLFL
FGTGPVRGFA VTMLLGVVIS MFTDITLVRM IMIWIIRKWK IKILHIQPFF NFIPQNTTFR
FMNARFIGIG VSFILSLSSI FLFFKPGLNF GIDFIGGSQM SITTSTPANL AILRSQLSTL
NIGEVTLQNI DNENAVLIRI PKQNGDEIQQ TIAIDKVKTT VKDIYPDAAF DQIEVVGPKV
SGELAIAGIT AVILAAIAMS LYIWWRFEWF FAAGAIITLI LDTTKMVGFF ALCQFDFNLT
AIAALLTIVG YSINDKVVVY DRMRENMRLY RTKPLREIID LSINQVLVRC IFTSATTVLA
MLPMAIWGGS TVQNFAIPMV AGVLIATSSS IFIATPILLL LGNWWHNHNK ETQI
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