| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0866 |
|---|
| Symbol | |
|---|
| ID | 4684294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 885545 |
|---|
| End bp | 886798 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639842049 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_989153 |
|---|
| Protein GI | 121602007 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.527312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACATT GTGTCGACGA ACACATGCAT ATAGATGCAA TCAAATCAAA AATTGGATAT
AAAGAATTTA TTATTGTCAT TGCAGCACTT ATGGCAATCA ATTCCATAGC CATTGATATT
ATGCTGCCGG CTATGCCGGA TATTTTACAA AGCTTACATG CTACAAATGA AAATGATCAG
CATTATATCA TTTCGTGTTA CCTTATTAGC TATAGTGCTA CCCAAATACT CTTTGGACCA
ATAAGTGATC GTTACGGTCG ACGTAATCTC GTCCTTATTG GTCTTGCTTT TTATTCATTT
ACAGCGATTG GTTGTGTATT TGTATCAAGT TTACCTATGT TATTAATTCT GCGTATCTTG
CAAGGTATTG GAGGAGCAAT GATACGTGTG CTTACAACTG CTATTATACG CGACCTCTAC
AGCGGAAAAA AAATGGCAGA AGTGATGTCG ATAACCATGA TGATTTTTCT TATTGCAGCA
ATGGTTGGAC CTGCAATAGG ACAAATAATT TTGTTATTTG GATACTGGAA ATTTATTTTT
ATATTTATGG GAATCTTCGG CTTTGGAATG ATGATTTGGA TTCAACTGCG CTTGCCTGAA
ACGTTACATA CACGGAGCCC TCTTTCTTAT TTCTCTGTAA AAAATAACTT ACGGTATGTC
ATTACTAATC GCACTACGCT GTGTTATACG CTTGCTACTT CTATTATTTT AGGCTGTGTC
TTTATATCCG TAAATACATC ACAACAAATA TATGAAGGAA TCTATAATTT AGGATTTTGG
TTTCCTGTTG CTTTTGCTGT CGGTGCTGCA TTTCAAGCTG TATCATCTTT TTTTAATTCT
CAACTTGTTC AATATCTTGG AATGCGGCGT ATTGCCCATA GTATGCTCGT GCTATTTTGC
GTTACTTCAT TTATTTGGTT TATTGCATCA ATCCTAACAG GTGGTGTTGT CCCTTTTCCT
TTTTATATGA TATTATACTG CACACTGATG TTTGCATGTG GTGGGATTTT AGCTAATTTC
AACACGCTTG CTCTCGAACC TTTGGGGGAA ATTGCCGGAA CTGCATCTTC TGTAACTGGT
TTTTTTCAAA CATCCATTGG TACAAGTCTT GGTTTTTTGA TTGCACAACG TTTTAATGAA
ACAACAATCA TCAATTCGGC AGGATTTTTC TTTCTTAGTC TCAGTGCTAT TCTTCTTATT
CTATGGACTG AAAAAGAGCG TTTTTGTATG AAAGAAATAT CTGAGGAAAC ATAA
|
|---|
| Protein sequence | MSHCVDEHMH IDAIKSKIGY KEFIIVIAAL MAINSIAIDI MLPAMPDILQ SLHATNENDQ
HYIISCYLIS YSATQILFGP ISDRYGRRNL VLIGLAFYSF TAIGCVFVSS LPMLLILRIL
QGIGGAMIRV LTTAIIRDLY SGKKMAEVMS ITMMIFLIAA MVGPAIGQII LLFGYWKFIF
IFMGIFGFGM MIWIQLRLPE TLHTRSPLSY FSVKNNLRYV ITNRTTLCYT LATSIILGCV
FISVNTSQQI YEGIYNLGFW FPVAFAVGAA FQAVSSFFNS QLVQYLGMRR IAHSMLVLFC
VTSFIWFIAS ILTGGVVPFP FYMILYCTLM FACGGILANF NTLALEPLGE IAGTASSVTG
FFQTSIGTSL GFLIAQRFNE TTIINSAGFF FLSLSAILLI LWTEKERFCM KEISEET
|
|---|
| |