Gene BARBAKC583_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0856 
Symbolrpe 
ID4684900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp877742 
End bp878434 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content38% 
IMG OID639842039 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_989143 
Protein GI121602542 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.0271981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCATT CCCCTATTAT TGCACCTTCA CTCTTATCTG CAGATTTTTC AAAACTTGGT 
CAAGAAATAT CCGATGTTGT TGATGCAGGT GCAGATTGGC TCCATCTTGA TATCATGGAT
GGCCATTTTG TTCCTAATAT CACCTTTGGA CCTGATACTG TAAAAGCTCT ACGCCCGTTA
AGCAAAGCAG TATTTGATGT TCATCTCATG ATTTCGCCTG TTGATCCTTA TCTTGAAGCT
TTTGCAAAAG CTGGCGCAGA TATTATAACC ATTCACGCAG AAGCAGGACC TCATATTCAT
CGTTCACTAC AAATAATCAA AATAATGGGG AAAAAAGCAG GGATTGCAAT CAACCCAAGC
ACTCCAGAGC ATGTGCTTGA GTATTTACTT GATCAATTAG ACCTCATCCT GATTATGACA
GTTAATCCTG GTTTTGGTGG ACAAAATTTC ATTCCAGAAA TGAAAGATAA AATTAAACGC
ATAAAAAATA TGATTGCCAA TCGGTCTATT GACCTTGAAG TTGATGGCGG TATTTCAGTG
GATACAATCG GAACAGCTGC AAAAGCTGGT GCCAATGTAT TTGTTGCAGG GTCTGCTATT
TATAAAAATG GTAATAAAGA TCTTTATAAA ACACGCATTA GTGAATTACG TCAAGCTGCA
ACCCTCCTCT CCCATAATAA GGAAAAATTA TGA
 
Protein sequence
MVHSPIIAPS LLSADFSKLG QEISDVVDAG ADWLHLDIMD GHFVPNITFG PDTVKALRPL 
SKAVFDVHLM ISPVDPYLEA FAKAGADIIT IHAEAGPHIH RSLQIIKIMG KKAGIAINPS
TPEHVLEYLL DQLDLILIMT VNPGFGGQNF IPEMKDKIKR IKNMIANRSI DLEVDGGISV
DTIGTAAKAG ANVFVAGSAI YKNGNKDLYK TRISELRQAA TLLSHNKEKL