Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0856 |
Symbol | rpe |
ID | 4684900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 877742 |
End bp | 878434 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639842039 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_989143 |
Protein GI | 121602542 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.0271981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCATT CCCCTATTAT TGCACCTTCA CTCTTATCTG CAGATTTTTC AAAACTTGGT CAAGAAATAT CCGATGTTGT TGATGCAGGT GCAGATTGGC TCCATCTTGA TATCATGGAT GGCCATTTTG TTCCTAATAT CACCTTTGGA CCTGATACTG TAAAAGCTCT ACGCCCGTTA AGCAAAGCAG TATTTGATGT TCATCTCATG ATTTCGCCTG TTGATCCTTA TCTTGAAGCT TTTGCAAAAG CTGGCGCAGA TATTATAACC ATTCACGCAG AAGCAGGACC TCATATTCAT CGTTCACTAC AAATAATCAA AATAATGGGG AAAAAAGCAG GGATTGCAAT CAACCCAAGC ACTCCAGAGC ATGTGCTTGA GTATTTACTT GATCAATTAG ACCTCATCCT GATTATGACA GTTAATCCTG GTTTTGGTGG ACAAAATTTC ATTCCAGAAA TGAAAGATAA AATTAAACGC ATAAAAAATA TGATTGCCAA TCGGTCTATT GACCTTGAAG TTGATGGCGG TATTTCAGTG GATACAATCG GAACAGCTGC AAAAGCTGGT GCCAATGTAT TTGTTGCAGG GTCTGCTATT TATAAAAATG GTAATAAAGA TCTTTATAAA ACACGCATTA GTGAATTACG TCAAGCTGCA ACCCTCCTCT CCCATAATAA GGAAAAATTA TGA
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Protein sequence | MVHSPIIAPS LLSADFSKLG QEISDVVDAG ADWLHLDIMD GHFVPNITFG PDTVKALRPL SKAVFDVHLM ISPVDPYLEA FAKAGADIIT IHAEAGPHIH RSLQIIKIMG KKAGIAINPS TPEHVLEYLL DQLDLILIMT VNPGFGGQNF IPEMKDKIKR IKNMIANRSI DLEVDGGISV DTIGTAAKAG ANVFVAGSAI YKNGNKDLYK TRISELRQAA TLLSHNKEKL
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