Gene BARBAKC583_0844 details

Gene Information

• Locus tag: BARBAKC583_0844
• Symbol: rnr
• ID: 4684514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 864619
• End bp: 866664
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 639842028
• Product: ribonuclease R
• Protein accession: YP_989132
• Protein GI: 121602334
• COG category: [K] Transcription
• COG ID: [COG0557] Exoribonuclease R
• TIGRFAM ID: [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases; [TIGR02063] ribonuclease R

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 0.360488
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAA AAAAATTACC ATCAGTCACT GTAGCAAAAA TTAATACACG TAATAAAGAT 
GGTGGTTTTA TTGCACACCC CCTTAAGTGG GAAAGTGATA CAAAACCCAA TATTGAAATA 
TTTCCTCCTC GCCATATGAG AAATATAAGT TTTCGTGTTG GAGATCACAT TCTTATAAAA 
ATTTTCCGAA ATAAAAATTT TCAAATCACG CCTTATACAG GACGAATTGT CCGTAAAATT 
GATGAGAAAG AAACAAAAAC TCTTGGTATC ATAAGAAAAT TAGAAAATGG CAAATGGCAA 
TTTTCCCCTA TAGAGCGTAA AATCAGAGAA TTTATTATTG ATGAACCCTC AGATATTAAC 
ATCAAATCTG GTAATCTTGT TGAAATTGAA ATTAAAAATA CGAATTGTAG ATTTAAAAGT 
GCAAAAATAA CAAATGTTTT AGGATATATT GATAGTGAAA AAACACTTGC AATGATTTCT 
CTCATTTCCA AGGGAATTCC TTATATTTTT CCTGAAGACG TTCTTGAACA AGCAAAAAAT 
ATAAAACCTG CTAACACAAT CAATCGAGAA GATTGGCGAC ACTTACCGTT TATCACAATT 
GATCCACCAG ATGCAAAAGA CCATGATGAT GCAGTTTATG CAATAAAGGA TGAAGACCCT 
ACAAATAGCG GTGGTTGGAT CATCATCGTC GCCATTGCAG ATGTTTCCTA TTATATAAAA 
ACAGGAAGCG CTTTAGATAA AGAGGCATTA CAGCGGGGGA ATTCTGTTTA TTTTCCTGAT 
CGAGTTGTGC CAATGTTACC GGAAACTATT TCCAATCATT TATGCTCTTT ACGTGAAGGA 
GAAGATAGGT TTTCTTTAGC TGTTCGCATG GTTTTTGATG CTAATGGTAA TAAACGCAAA 
CATAGCTTTC ACCGTATTGT AATGCGAACA GCTGCTAAAT TATCTTATCA AGAGGTACAA 
TGCGCAATTG AAGGAAACAC AAATGAAAAA ACAGCTCCTC TTATAGAAAA TATTTTACAA 
CCATTGTGGT CAGCTTATAC TAGCCTTAAA ATTGCACGCG ACCTCCGGCA ACCATTAGAA 
TTAGAAATAT CCGAAAAAAA AGTTATTCTT GATCAAAATG GATGCATCAA AGATGTTGTA 
CGTCCACCTC ATTTAGAAGC TCATCGTCTC ATTGAAGAAT TTATGATACA AGCTAATGTT 
TCTGCTGCTG AAACATTGAA AAAACATCGT CAGTCCTTCA TTTATCGTAT TCATGATGAA 
CCTTCACTCA CAAAACAAGA AACACTGCGA AATTCTCTTC ATAATTTTAA AATACCTCTC 
TCCTCAAAAG TAAAACTTAC GTCAAAACAA CTGAATAATA TTCTCACAAC AGTCACAAAT 
ACACAGCAAC AGGAATTAAT AAATCAAATT ATTTTACGCT CACAATCGCA AGCTGAGTAT 
AATCCTAAAA ATATAGGTCA TTTTGGTTTA AATTTGCAAA ATTATGCACA TTTTACATCA 
CCGATCCGTC GCTATGCTGA TCTGATTGTT CATCGAGCAC TTATTAAAGC TTTGCAATTA 
GGCGATGATG GACTAACAGA TGAACAAGAA CAAAATCTCG TAGAAATCGC CACGCAAATT 
TCTTCATATG AGCGTCGTGC TATGATGGCT GAGAGAGAAA CAATTGATCG ACTCGTTGCG 
CACTATTTAG CTGATAAAAT TGGTCATTTA TTTAAAGGTC GCATTTCCGG GGTTACAAAA 
GCAGGTCTTT TTATTTCTCT TGATAAACTC AATGCAGATG GTTTTGTACC TATTTCTACT 
CTTAAAAATG ATTATTATCA CTTTGATGAA GAACAGCACG CCCTGATAGG AAAACATAGC 
TATAAATACT ATCAACTTGG CGATGCAGTA GAAATCAAAC TTGTAGAAGT ACAACCTTTT 
GCTGGTGCTT TATGTTTTGA AATATTAACA GAACCTCAGC TATTAACTTC CTCATCTCTT 
TCTTACCATA AAACAAAATC TACAATGAAA AGACGGAAAT GTAATTCCTA CAAAAGAAAA 
GTCTAA 

 

Protein sequence

MTKKKLPSVT VAKINTRNKD GGFIAHPLKW ESDTKPNIEI FPPRHMRNIS FRVGDHILIK 
IFRNKNFQIT PYTGRIVRKI DEKETKTLGI IRKLENGKWQ FSPIERKIRE FIIDEPSDIN 
IKSGNLVEIE IKNTNCRFKS AKITNVLGYI DSEKTLAMIS LISKGIPYIF PEDVLEQAKN 
IKPANTINRE DWRHLPFITI DPPDAKDHDD AVYAIKDEDP TNSGGWIIIV AIADVSYYIK 
TGSALDKEAL QRGNSVYFPD RVVPMLPETI SNHLCSLREG EDRFSLAVRM VFDANGNKRK 
HSFHRIVMRT AAKLSYQEVQ CAIEGNTNEK TAPLIENILQ PLWSAYTSLK IARDLRQPLE 
LEISEKKVIL DQNGCIKDVV RPPHLEAHRL IEEFMIQANV SAAETLKKHR QSFIYRIHDE 
PSLTKQETLR NSLHNFKIPL SSKVKLTSKQ LNNILTTVTN TQQQELINQI ILRSQSQAEY 
NPKNIGHFGL NLQNYAHFTS PIRRYADLIV HRALIKALQL GDDGLTDEQE QNLVEIATQI 
SSYERRAMMA ERETIDRLVA HYLADKIGHL FKGRISGVTK AGLFISLDKL NADGFVPIST 
LKNDYYHFDE EQHALIGKHS YKYYQLGDAV EIKLVEVQPF AGALCFEILT EPQLLTSSSL 
SYHKTKSTMK RRKCNSYKRK V