| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0843 |
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| Symbol | topA |
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| ID | 4684328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 861827 |
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| End bp | 864436 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639842027 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_989131 |
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| Protein GI | 121601698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.077347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG TTATCGTCGA ATCTCCAGCC AAAGCAAAAA CAATTAATAA ATATCTTGGG
TCTCAATATA AGGTCATAGC ATCATTTGGA CATGTCCGTG ACTTATCTGC CAAAGATGGC
TCTGTTCTTC CTGATAAAGA TTTTTCGATG AAATGGGATG TTGATACCGC TTCTGCAAAA
CGTTTAAATG AAATAGCAAA AGCCGTTAAA GAAGCGAATA GCCTTATTTT GGCAACTGAC
CCTGATCGTG AAGGGGAAGC TATTTCATGG CATATCCTTG ATGTTCTTAA CCAAAAAAAA
ATTTTAAATG ATAAGCCTGT TAAACGGGTC GTTTTTAATG CAATTACAAA ACAATCTGTA
CTTGACGCTA TGAATAATCC ACGGGATATT GATGTATCCC TTGTCGATGC TTACCTCGCA
CGCCGTGCTC TTGATTATCT GGTTGGTTTT ACACTTTCCC CTGTTTTATG GCGTAAATTA
CCTGGTGCAC GTTCAGCTGG ACGTGTGCAA TCAGTTGCTT TACGTATTAT TTGTGATCGC
GAATCAGAAA GAGAACATTT TGTTAAAGAA GATTATTGGT CAATCACAAC ATACTTAAAA
ACCCCCAGAA ATGACGTCTT TCAAGCACGG TTGATAGAAT TTAATCAAAA AAAACTAAGC
AAACTTGATA TCCAATCTCA AGAACAAGCA AATCAGATCC GTCTTATGTT GGAAGAAGCT
GAATATTGTA CACTAAGTGT TGAGGCAAAA CCAACAAAAA GAAATCCTTC TCCACCATTT
ACAACATCCA CTTTACAGCA AGCTTCCTCT TCAAAATTAG GTTTTTCAGC TTCTCGTACC
ATGCAAATTG CTCAAAAACT ATATGAAGGT GTTGAAATGA ATGGTGAGAC AGCAGGACTT
ATTACCTATA TGCGTACTGA TGGCGTGCAA ATAGCCCCAG AGGCTATTGA TTCAGCACGA
AGAGCAATCA GTAATTCCTT TGGAAATAAC TATCTTCCTG AAAAACCACG TTTTTATTCA
ACAAAAGCAA AAAACGCACA AGAAGCACAT GAAGCCATTC GCCCAACAGA TTTTAAACGT
CATCCCGATC AAGTTCGCAA TTTCCTCGAT AATGATCAAG CAAAACTGTA TGAATTGATA
TGGAAACGCG CTATTGCTAG CCAAATGCGT TCTGCTGAAA TTGAACGTAC AACCGTTGAA
ATTAAAGCGG TTCAAGAAGA AAATTACGCA AATTTACGAG CAACAGGCTC TGTTACACGT
TTTGATGGTT TTATTGCCGT CTATACCGAT CAACGCGATG AAACAAACGG TGATGAAGAT
GACCTAGCAC GCTTGCCCCC AATAAATGTT AATGAAATTC TTACAAAAGA AAAAATCGAA
ACGGCACAAC ACACCACAGA CCCCCCTCCT CGTTATTCTG AAGCTTCATT AATTAAAAAG
CTTGAAGAAT TAGGGATTGG TCGACCTTCA ACTTATGCAT CCACATTAGC AACACTTTGT
GATCGTGGCT ATATCATCAT TGACAAAAGA CAACTTACTC CTGATGCTAA AGGACGTATT
GTCACAGCTT TTCTTGAAAA TTTTTTCAAT CGCTATGTGG AATATGGCTT CACAGCAAAT
CTTGAAGAAA AATTGGACCT CATATCAGAC GGAAAACTCT TTTGGAAAGA CGTTTTACGC
GATTTTTGGG ATGAATTTAA TGCATCCGTT ACCAATATCC AAGAATTGCG TATAACGAAT
GTCCTTGACG TTTTAAACAC AACATTAGCA CCTCTTGCTT TTCCTACACG TGAAGATAGC
AGTGATCCTC GTTCTTGCTC CCTTTGTAAA CATGGTCAAT TATCGTTAAA ATTAGGTCGT
TATGGTGCAT TTGTTGGTTG TTCTAATTAT CCTGAATGTA AATATACAAA ACAACTTGGT
ACAGACGCAG GAGAAGAACG TGAAGCAGCA CACAATGATG AACCTGTTAT ACTCGGTGTT
GATCCTGAAA CAGGAAAAGA TATTTTTCTT CGCAATGGCC GCTTTGGTCC ATATATTCAG
CTTGGTGAAG GAAAAGAAGC TAAGCGCTCG GGATTACCAA AAGGATGGAA AACAGAAAAT
GTTAATCTTG ATAAAGCCCT ATCTTTATTG TCTCTGCCAC GTGAAGTCGG AATTCATCCT
GAAACAGGTC AAATGATCAC AGCTACAATT GGACGATATG GTCCTTATCT TACTCATGAT
AGGAAATATG CAGCCCTTTC AAATGTAGAT GACGTCTTTG ATATTGGCAT TAATCGTGCT
GTCACAGTGC TAGCTGAACA AAAAGAAAAT AAAGCTAATC GAGGTAAAAC AGTATCTTCC
GTATTAGCGG CATTAGGTGA TCACCCAGAT GGGGGATCGA TTACTGTACG TGATGGGCGT
TATGGTTCAT ATGTTAATTG GGGGAAAATT AATGCAACAT TACCAAAAGA TAAAGATCCA
GCTAACATAA CACTTTCAGA AGCATTAGAG CTCTTATCCG CTAAAACATC TGCCCCTTCA
AAAACAAGAA AGGTAGCGGC TAAAAAAACA GCTCCAAAGA AAAATACAAC AGTAAAGAAA
GCTTCTTCTA CAATAAAAAA AGCAAAATAA
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| Protein sequence | MDIVIVESPA KAKTINKYLG SQYKVIASFG HVRDLSAKDG SVLPDKDFSM KWDVDTASAK
RLNEIAKAVK EANSLILATD PDREGEAISW HILDVLNQKK ILNDKPVKRV VFNAITKQSV
LDAMNNPRDI DVSLVDAYLA RRALDYLVGF TLSPVLWRKL PGARSAGRVQ SVALRIICDR
ESEREHFVKE DYWSITTYLK TPRNDVFQAR LIEFNQKKLS KLDIQSQEQA NQIRLMLEEA
EYCTLSVEAK PTKRNPSPPF TTSTLQQASS SKLGFSASRT MQIAQKLYEG VEMNGETAGL
ITYMRTDGVQ IAPEAIDSAR RAISNSFGNN YLPEKPRFYS TKAKNAQEAH EAIRPTDFKR
HPDQVRNFLD NDQAKLYELI WKRAIASQMR SAEIERTTVE IKAVQEENYA NLRATGSVTR
FDGFIAVYTD QRDETNGDED DLARLPPINV NEILTKEKIE TAQHTTDPPP RYSEASLIKK
LEELGIGRPS TYASTLATLC DRGYIIIDKR QLTPDAKGRI VTAFLENFFN RYVEYGFTAN
LEEKLDLISD GKLFWKDVLR DFWDEFNASV TNIQELRITN VLDVLNTTLA PLAFPTREDS
SDPRSCSLCK HGQLSLKLGR YGAFVGCSNY PECKYTKQLG TDAGEEREAA HNDEPVILGV
DPETGKDIFL RNGRFGPYIQ LGEGKEAKRS GLPKGWKTEN VNLDKALSLL SLPREVGIHP
ETGQMITATI GRYGPYLTHD RKYAALSNVD DVFDIGINRA VTVLAEQKEN KANRGKTVSS
VLAALGDHPD GGSITVRDGR YGSYVNWGKI NATLPKDKDP ANITLSEALE LLSAKTSAPS
KTRKVAAKKT APKKNTTVKK ASSTIKKAK
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