Gene BARBAKC583_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0813 
SymbolsufS 
ID4684811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp833362 
End bp834606 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content37% 
IMG OID639841997 
Productcysteine desulfurase SufS 
Protein accessionYP_989103 
Protein GI121602390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.0265605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT ACACACAAAC ATTAAATTAT AATGTAGAAG AAATTCGACG TGATTTTCCT 
ATTTTGCATC ATACTATTTA TGGTAAGCGA TTAGCTTATC TTGACAACGG GGCTTCTTCT
CAAAAGCCAC AACCAGTTCT CGATGCAATG AATAATATTC ATCGAAGCAG TTATGCTAAT
GTACATCGAG GAATACATTT TTTATCAAAT TCAGCAACAC AATTTTATGA AAATTCTCGT
GAAACGGTTC GTGCTTTTTT AAATGCACAA ACAGTTGAAG AAGTTATTTT TACTAAAAAT
GCAACAGAAG CTATCAATAC CGTGGCTTAT GGCTGGGGAA TGTCTAGATT GAGTGAAGGT
GATGAAATCA TCCTCACGAT CATGGAACAT CATTCAAATA TCATTCCCTG GCATTTTATC
CGTGAACGCA AAGGTGTTAA GCTTGTTTTT GTGCCCGTTG ATGAAGATGG TATTTTACAC
ATTGAAGATA TTCAAAAAGC TTTCAGTAAT AAAACTCGGC TTGTTGCTAT TACTCATATG
TCGAATGTAT TGGGAACTGT CCCCCCTGTT AAAGAGATAG TAAAGCTAGC GCACCAAAAT
GCTGTTCCCG TCCTTATCGA TGGTTCTCAG GGAGTTGTGC ATTTAACAGT TGATATGCAA
GATCTTGATT GTGATTGGTA TGTTTTTACC GGTCATAAGA TTTATGGTCC TACAGGTATC
GGTGTTCTTT ATGGGAAAAA ATCTCGCTTA GAAGAGATGC ATCCTTTTCA AGGAGGAGGG
GAGATGATCG AGGAGATAAC AGTTGATCAA GTTTCCTACA ACTCTCTTCC ATATCGTTTT
GAAGCTGGAA CTCCTCCTAT AGTAGAGGCT GTTGGATTGG CTACTGCTAT TAATTACATA
GATGAAAAAA ATAAAAATTC TATTCATGCA CATGAAATGG AACTTTTGGC TTATGTGCAT
GAAAGGCTTG AAACAGTTAA ATCATTGCGT ATTTATGGTC GTGCTCCTAA TAAGGGACCT
ATCGTATCTT TTACAATTGA AGGCATTCAT CCACATGATA TCGCAATGTT TATTGATCGA
GAAGGTATTG CTATACGTGC AGGAACACAT TGCGCACAGC CTCTATTACA ACATTTTGGC
TCAACATCAA CTTGCCGTGC ATCATTAGCC ATGTATAATA ATCACGAAGA TGTTGATCAA
CTAGTTAAAG CATTAGAAAA AGCAAGGACA TTTTTTAATG GATAA
 
Protein sequence
MENYTQTLNY NVEEIRRDFP ILHHTIYGKR LAYLDNGASS QKPQPVLDAM NNIHRSSYAN 
VHRGIHFLSN SATQFYENSR ETVRAFLNAQ TVEEVIFTKN ATEAINTVAY GWGMSRLSEG
DEIILTIMEH HSNIIPWHFI RERKGVKLVF VPVDEDGILH IEDIQKAFSN KTRLVAITHM
SNVLGTVPPV KEIVKLAHQN AVPVLIDGSQ GVVHLTVDMQ DLDCDWYVFT GHKIYGPTGI
GVLYGKKSRL EEMHPFQGGG EMIEEITVDQ VSYNSLPYRF EAGTPPIVEA VGLATAINYI
DEKNKNSIHA HEMELLAYVH ERLETVKSLR IYGRAPNKGP IVSFTIEGIH PHDIAMFIDR
EGIAIRAGTH CAQPLLQHFG STSTCRASLA MYNNHEDVDQ LVKALEKART FFNG