| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0798 |
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| Symbol | mfd |
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| ID | 4684969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 810524 |
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| End bp | 814015 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639841984 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_989090 |
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| Protein GI | 121602625 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.151739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATAT TTGAAAAAAT CCTTTTTCCT AACAATCAAA ATGATTTAAT AATTCTTGAT
GGAATTATCG ATGGAGTTGA GGCTTTTGCT CTTGCTCAAT TAAGTACAGA AATTGCTCAG
GGTAAACCAC TTGTTTATGT AGTTCGTGAT GAAACAAAAA TTGCTCATTT ACAGCAGGCT
TTAAGTTTTA TTGAGCCCAA TTTACCTGTT CTTCATTTTC CTGCGTGGGA TTGTTTACCT
TATGATCGTG TATCGCCTGC AATAACTATT ACTGCCCGTA GGCTTTCAGT TCTGGCACAT
ATATCGACTT TACGTAATAA TCCCCATCCT GCGATTATAG TGACAACAGC AAACGCAATC
ATTCAAAGAT TGCCACCATG CGCAATGATT GATAATCAGA TTCTTCATGT ACGTGTTGGT
CAGCGTGTTG ATATGGATCA TTTGATCCAT TACTTAGAAC GTAATAATTT TGAACGTGTT
GGAATTGTGC GCGATGTCGG TGAATTTGCT GTAAGAGGAG GAATTATTGA TATTTTTTCT
CCAAGCGAAG TTGAACCTTC ACGTCTTGAT TTTTTTGGCG ATACCTTAGA GACAATCCGT
GTATTTGATA CAGAAACGCA ACGGACAATA AAAAATAGAA CTGATTTTTT TCTGCAATCA
ATGAGTGAGG TTATCCTCAC ACCGGAGCTC ATCAGTCGTT TTAAAAGAAA TTATATCAGT
ACATTTGGTG TACCACAAAA AAATGATACA CTCTATGAAG CCCTTTCTCA AGGAAGACGT
GTTGCTGGCA TGGAGCATTG GTTACCATTT TTTTATGAAA AGCTCGATAA TTTTTTTGAT
TATTGTGGTA ATTTTCCTAT TATTTTTGAA AATCTTATAC AAGAAGCTCT GATTGAACGT
TATCGTCTTA TTGAAGATTA TTATGCTGAC CGCAAAGAGC ACGAAAATGA TAAAGAAAGT
GATGTTTCTT ATCATCCAGT AGAACCACAT CTACTGTATA TGAGGCTAGA GGAAGTTTTA
GAATGTGCAC AACGATCCGG TCAACGTATT GATTTTACGC CTTTTAATGT CCCAAAAACT
TCTGAACAGA TAACGGTTTT TCATGCGAAT GTTATTCCAG GGTATGATTT CGTAAAAGAG
CGTAATGCAC AAGATAAAAA TATTTTTTTG AGCGTGGTTG ATCATATTTC TTCATTGCAA
TCTGCTGGTA AAAAAATTCT CTTAGCCTGT TGGAGCGAAG GATCTATGGA TCGCTTATTG
CAAGTGCTCG ATGAATATGG ATTAAAAAAA GTAGAAATTG CAAAATCATT AAGCACTGTA
AAAACAAGTT CATCTCATTC TATATTTGCA GCTGTTATAA CGATTGATCA TGGTTTTGAA
TCTGAAGATT TTGTTATTAT AACAGAACAA GATATTCTTG GTGATCGATT AGTAAGATCT
TCGAAACAGC GTAAACGCAA TGCGAATTTT ATTTCTGAAA TTTCTACATT AAATTCTGGT
GATTTTGTTG TTCATATTGA TCACGGTGTT GGGCAATTTA TTGGTCTCAA AACCATTATG
ACAGCCGGAA TTTTACGTGA TTGTCTTGAA ATCAGCTATG CTGGAGGTGA TCGATTATTT
TTGCCTGTTG AAAATGTAGA ACTTTTATCA CGTTATGGAT CAGAAGATAC AGATGTAACA
TTAGATAAGC TAGGCGGCGT TGCTTGGCAA GCACGTAAAA CACGGTTCAA AAAGCATTTA
TTGCAGATTG CTGGGCAATT AATCTGTATA GCTGCAGAGC GCGCTATGCG TTCTGCTCCT
ATTTTGACTC CACCGGTTAG CCTATTTGAT GAATTTGTTG CACGCTTTCC TTATGAAGAA
ACAGAAGATC AGATGAGTGC AATTGATGCG GTTTTGGATG ACTTAGAAGC AGGAAAACCA
ATGGATCGTC TCATATGTGG TGATGTTGGT TTTGGTAAAA CAGAAGTTGC TATTCGAAGT
GCTTTCGTTG CTGCGTTGAA TGGTTATCAA ACTGCCGTTG TTGTGCCAAC AACTTTACTA
TCACGGCAGC ATTACAAGAC TTTTATTGCA CGTTTTCAAG GATTACCTGT TAAAATTGGT
CATGTTTCAA GACTTGTAAA AGCTGCAGAA TTGACCAAAG TGAAAAAGGG GATCTCAGAT
GGTACAATCG ATATCGTTGT TGGAACGCAT GCGTTATTGA GCGGATCAGT TAATTTTTCA
CGATTAGGGT TATTGATCAT CGATGAAGAG CAGCACTTTG GTGTAAAGCA CAAAGAGCAT
CTCAAAGAGC TTAAAAGTGA TATTCATGTT CTTACACTTT CAGCAACCCC TATACCAAGA
ACTTTAGGAC TTGCCTTATC AGGGGTGCGT GAACTCTCAT TAATTACGAC TCCACCTATT
GATAGAATGG CAGTTCGTAC TTTTATTTCA CCTTTTGATG CGCTTGTTAT ACGCGAAACA
TTGCTGCGTG AGTATTATCG TGGAGGACAG AGTTTTTACG TTTGTCCTCG TATTTCTGAT
CTTTCTTACG TGGAAGAATA TCTCAAAAAG CACGTACCTG AACTCAAATT TGTTATAGCC
CATGGACAGA TGCCAGCTGG ACAGCTTGAT GATATTATGA ATGCATTTTA TGATGGAAAA
TATGATGTAC TGCTTTCCAC GACGATCATT GAATCAGGGC TTGATATTCC AACTGCTAAT
ACATTAATTG TGCATCGTGC TGAGATGTTT GGTCTCTCTG CACTTTATCA ATTACGGGGA
AGGGTGGGAC GTTCCAAACA ACGCGCTTAT GCACTTTTTA CTTTTCCATC TAATAAAGTT
TTAACGACTG CTGCTCAGCG TCGTCTTAAA ATTTTGCAAT CTCTTGATAC TTTAGGAGCA
GGGTTTCAAT TGGCTAGTCA TGACATGGAT ATTCGTGGTT CAGGTAATTT CCTAGGCGAA
GAACAGTCAG GACATATTAA AGAAGTTGGA TTTGAGCTTT ATCAAAAAAT GCTTGAAGAG
GCCGTTTCTG AGTTAAAAGA AGGAAAACAT AATGAAGATC TTCAATGGTC ACCTCAAATT
TCAGTAGGTA CAACAGTTTT AATACCAGAA AATTTTGTCC CTGATTTATC ATTACGTATG
AGTCTTTATC GCCGTTTAAT GGCGCTTGAG AATTTAGAGG AAATTAATGA ATTAGGAGCT
GAATTGATCG ATCGTTTTGG TCCTCTTCCA TTAGAAGTTC AACATCTACT TAAGATTGTT
TATATCAAAG CTTTATGTCG AAAAGCACGT GTAGAAAAAT TGGATGTTGG ACCCAAAGGT
GTTATCATTC AGTTTCGCAA TAATCATTTT AACAACAGTG CTGCTCTTGT TCAATGGATT
GGAGAACAAG GTTCAATGGC AAAAATCCGA CCAGATCAAA CTATTGTTTT TATTCGTGAT
TGGCAAACAG CAGATAAAAG ACTATTGGGA GCAGAGACCA TTGTGACAAA ACTTACAGAA
ATGATACAAT AA
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| Protein sequence | MPIFEKILFP NNQNDLIILD GIIDGVEAFA LAQLSTEIAQ GKPLVYVVRD ETKIAHLQQA
LSFIEPNLPV LHFPAWDCLP YDRVSPAITI TARRLSVLAH ISTLRNNPHP AIIVTTANAI
IQRLPPCAMI DNQILHVRVG QRVDMDHLIH YLERNNFERV GIVRDVGEFA VRGGIIDIFS
PSEVEPSRLD FFGDTLETIR VFDTETQRTI KNRTDFFLQS MSEVILTPEL ISRFKRNYIS
TFGVPQKNDT LYEALSQGRR VAGMEHWLPF FYEKLDNFFD YCGNFPIIFE NLIQEALIER
YRLIEDYYAD RKEHENDKES DVSYHPVEPH LLYMRLEEVL ECAQRSGQRI DFTPFNVPKT
SEQITVFHAN VIPGYDFVKE RNAQDKNIFL SVVDHISSLQ SAGKKILLAC WSEGSMDRLL
QVLDEYGLKK VEIAKSLSTV KTSSSHSIFA AVITIDHGFE SEDFVIITEQ DILGDRLVRS
SKQRKRNANF ISEISTLNSG DFVVHIDHGV GQFIGLKTIM TAGILRDCLE ISYAGGDRLF
LPVENVELLS RYGSEDTDVT LDKLGGVAWQ ARKTRFKKHL LQIAGQLICI AAERAMRSAP
ILTPPVSLFD EFVARFPYEE TEDQMSAIDA VLDDLEAGKP MDRLICGDVG FGKTEVAIRS
AFVAALNGYQ TAVVVPTTLL SRQHYKTFIA RFQGLPVKIG HVSRLVKAAE LTKVKKGISD
GTIDIVVGTH ALLSGSVNFS RLGLLIIDEE QHFGVKHKEH LKELKSDIHV LTLSATPIPR
TLGLALSGVR ELSLITTPPI DRMAVRTFIS PFDALVIRET LLREYYRGGQ SFYVCPRISD
LSYVEEYLKK HVPELKFVIA HGQMPAGQLD DIMNAFYDGK YDVLLSTTII ESGLDIPTAN
TLIVHRAEMF GLSALYQLRG RVGRSKQRAY ALFTFPSNKV LTTAAQRRLK ILQSLDTLGA
GFQLASHDMD IRGSGNFLGE EQSGHIKEVG FELYQKMLEE AVSELKEGKH NEDLQWSPQI
SVGTTVLIPE NFVPDLSLRM SLYRRLMALE NLEEINELGA ELIDRFGPLP LEVQHLLKIV
YIKALCRKAR VEKLDVGPKG VIIQFRNNHF NNSAALVQWI GEQGSMAKIR PDQTIVFIRD
WQTADKRLLG AETIVTKLTE MIQ
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