| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0729 |
|---|
| Symbol | ndvA |
|---|
| ID | 4685040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 732964 |
|---|
| End bp | 734751 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639841916 |
|---|
| Product | cyclic beta-1,2-glucan ABC transporter |
|---|
| Protein accession | YP_989028 |
|---|
| Protein GI | 121602048 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.0382345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGTTAT TTAGAACTTA TGTTCGTGTT CTTTCATATC TGAATCAAGA AAAAAATGCA
TTTCTTCTCA TTTGCACCGC TAATATTACA TTAGCTATTA TTACAATTGC AGAACCTATT
TTATTTGGAC ACGTTATTGA TACCATCGCA GATAAATCAG ATACTCTTGT GACTCTCGCA
GTCTGGATGT GTTTTGGTAT TTCTAACATT ATTGCTTACG TCCTCGTAGC TCGCGGTGCT
GATCGCTTAG CACACAGATG CCGTTTAACT GTTTTAGAAA AGTCTTTTGC ACGTATTATC
AGTATGCCCC TTATTTGGCA TCAACAACGT GGTACATCTC ATGCCCTTCA CACACTACTG
CGCGCTACAG ATTCCATGTC TTCTATATGG CTTGAATTTA TGCGACAACA CCTCTCAACC
TTCGTCGCAC TCTTTGTTCT CGTTCCAGTA ACCTTTAAAA TGAACTGGCG TCTTTCAATC
GTTTTAATGG TTCTTGCCAT CCTCTATATT TTAATTGCAC GTTTGGTAAT GCAAAAAACA
AAAAACGGGC AAGCCGCTGT CGAACACTAT CACCATAACC TTTTTAAACA TATCACTGAT
TCAATCTCTA ATGTTTCCAT TGTACAAAGT TATAACCGAA TAACCGAAGA AACTTCAGCA
CTTCATCAGC ATACCAACAA CCTTCTTAGT GCACAAACCC CTGTCTTAAA TTGGTGGGCA
CTTGCAAGTG GTTTAAACCG AATGGCTTCA ACTATTTCAA TAGTTTGTGT ACTTCTTCTT
GGTGCTTTTT TCGTGATAAA AGGCCAATTA AGTGTAGGAG AAGTTGTTAC TTTTGTTGGA
TTTTCTCAAT TAATGATTGG TCGTCTTGAT CAAATTAGTG GTTTCATCAA TTTAGCTGTA
TCTTCGCAAG CAAAGCTACA AGAATTTTTT GATATGGAGG ATTCAACTTT TCAAACCAAT
GAACCTGCAA ATCTTCCTTC TCTCCCAAAC GTTAAAGGCG CGATCCAATT TCATCATGTT
ACCTATGAAT TTCCAAATTC TTCCCAAGGT GTCTTTGATA TTTCATTTGA GGTTAAAGCA
GGACAAACTG TTGCTATTGT AGGACCAACA GGTGCTGGAA AAACAACATT AATTAATTTA
TTACAACGTG TATATGACCC TACTGTTGGA TATATCAGCA TTGATGGAAT AAATATAAAT
TCTATCAATC GGGAATCGTT ACGCAAAGCT TTAGCAACAG TATTTCAAGA TGCAGGTCTT
TTTGACCGTA CTATTCGCGA TAATATTTCT ATAGGAAAAA CAGGGGCAAC AGATGAAGAA
CTTTATGAGG CTACAAAAAC GGCTTCTGCT CATGACTTTA TTCTAAAAAA GAGCAAGAAT
TATGATACAT TGGTTGGTGA ACGAGGTTCG CAATTATCAG GCGGAGAAAG GCAACGATTA
GCAATTGCAC GCGCTATTTT GAAAAATGCT CCTATTCTCA TTTTGGATGA AGCAACCAGT
GCTCTTGATG TTGAAACAGA AATCCGTGTT AAAAATGCGA TCGATTGCAT AAGCCAGAAT
CGTACCACAT TTATTATAGC CCATCGCCTT TCAACAATCC GTAATGCTGA TCTTGTACTC
TTTTTAGATC AGGGTCGCTT AATTGAAAAA GGTAGCTTTC AAGAATTAAT CAATAAAGAT
GGCCACTTCT ATAAATTGCT GAAAGCTGGC GGTTTAACAA TCAATCAACC CGCAACAAAA
GAAAAAGATG ACAATATAAT TCCATTGCGC AAAGCAATGG CATTATAA
|
|---|
| Protein sequence | MSLFRTYVRV LSYLNQEKNA FLLICTANIT LAIITIAEPI LFGHVIDTIA DKSDTLVTLA
VWMCFGISNI IAYVLVARGA DRLAHRCRLT VLEKSFARII SMPLIWHQQR GTSHALHTLL
RATDSMSSIW LEFMRQHLST FVALFVLVPV TFKMNWRLSI VLMVLAILYI LIARLVMQKT
KNGQAAVEHY HHNLFKHITD SISNVSIVQS YNRITEETSA LHQHTNNLLS AQTPVLNWWA
LASGLNRMAS TISIVCVLLL GAFFVIKGQL SVGEVVTFVG FSQLMIGRLD QISGFINLAV
SSQAKLQEFF DMEDSTFQTN EPANLPSLPN VKGAIQFHHV TYEFPNSSQG VFDISFEVKA
GQTVAIVGPT GAGKTTLINL LQRVYDPTVG YISIDGININ SINRESLRKA LATVFQDAGL
FDRTIRDNIS IGKTGATDEE LYEATKTASA HDFILKKSKN YDTLVGERGS QLSGGERQRL
AIARAILKNA PILILDEATS ALDVETEIRV KNAIDCISQN RTTFIIAHRL STIRNADLVL
FLDQGRLIEK GSFQELINKD GHFYKLLKAG GLTINQPATK EKDDNIIPLR KAMAL
|
|---|
| |