| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0698 |
|---|
| Symbol | rplC |
|---|
| ID | 4685002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 711632 |
|---|
| End bp | 712372 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639841885 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_988997 |
|---|
| Protein GI | 121601833 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000000000000853628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCAG GTGTAATAAC ACAGAAGTTG GGCATGACCA GTATCTATAA TGACACTGGT
GAAAGAGTGC CCGTAACAGT GCTTCGTTTA GAGAATTGTC AGGTTATTGC TCAGCGTACA
GTTGAAAAGA ATGGTTATAC TGCTGTTCAA TTAGGTGTAG GGCTTGCAAA ATTTGAAAAA
ACCTCAAAAG CTCTTCGTGG GCACTTTTCT AAGGCTTTAG TTGAACCTAA GGCTAAAATA
GTGGAATTCC GTGTTAGTTC CGATAATCTT CTTGATGTCG GTACTGAGAT TACGGTAGAG
CATTTTGTTC CTGGGCAAAG AGTCGATGTA ACAGGAACGA GTATAGGTAA GGGTTTTGCC
GGCGTTATGA AACGGCATAA TTTTGGTGGG CATCGTGCTT CACATGGTAA TTCAATTACA
CATCGTGCTC ATGGTTCGAC AGGTCAGTGT CAGGATCCAG GTAAGGTGTT TAAAGGTAAA
AAAATGGCTG GCCATATGGG GCAGGTGCGT GTAACAACAC AAAATGTTGA AGTTGTTTCT
ATAGATGTTG ATCGCGGTTT AATTTTGGTG CGTGGTGCTG TTTCTGGTTC TAAGGGGGCT
TGGGTTTTAG TTCGGGATGC CGTAAAAAAG CGTCTTCCTG ATAATGCTCC AAGACCTGCT
GGTGTTCGCA GTCCTGCTAA TGTGAAAGTG AAGCCGGCGA CTCCAATAGC AGAAGTCTCT
GTAGCTGAGG GAGTCGAATA A
|
|---|
| Protein sequence | MRSGVITQKL GMTSIYNDTG ERVPVTVLRL ENCQVIAQRT VEKNGYTAVQ LGVGLAKFEK
TSKALRGHFS KALVEPKAKI VEFRVSSDNL LDVGTEITVE HFVPGQRVDV TGTSIGKGFA
GVMKRHNFGG HRASHGNSIT HRAHGSTGQC QDPGKVFKGK KMAGHMGQVR VTTQNVEVVS
IDVDRGLILV RGAVSGSKGA WVLVRDAVKK RLPDNAPRPA GVRSPANVKV KPATPIAEVS
VAEGVE
|
|---|
| |