Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0658 |
Symbol | |
ID | 4684182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 677017 |
End bp | 678399 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639841845 |
Product | putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein |
Protein accession | YP_988959 |
Protein GI | 121602131 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00000000641362 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTTTT CTTTCCTTTG CTTAGATGAT CTTACTCAAA TGCCAGTAGC TGGATGTCTT GGGACATCTG GTATAAGTCA TACCTATTTG GATACACTTC TTGATGGCTT CAAAAATACA GCTGTACTCT CTATTTCTTC ATTAATATTA GCTGTATTTG TCGGTGTTGT TATAGGAACA GTGCGTACTC TGCCTAATAC TTCCGTAATC AATAACACAT TTCGCGCTAT AGGCGGAATC TGGGTAGAAA TTATGCGTAA CATTCCTTTG CTGGTACAAG TATTTTTATG GTACTTTGTC GTCCCTAAAA TTTATCCACC AGCAATGAAT TTTTCACCAA TTATATTAAT AACCTGTGCT TTAGGTTTTT TTACATCCGC ACGTATCGCA GAACAGGTTC GCTCAGGAAT TGAATCTATC CCTTCTGGAC AACGTTATGC AGCCATGGCA ATAGGATTTA CTACTTATCA AAGTTATCGC TATATTATGA TACCGCGTGC TATTCGTACT ATCTTGCCAC CCCTTACGAG TGTCGCGCAC GCTCAAAATG ATACACTTGA GAGAATTAAA CAAACAGGAA GAATCACTTT AGGTGTTCGC GAATCTTCCG GTTTAGCTTA TGCACTTGGT AATGGTAGAT ATACAGGATT TCATACAGAA ATGGCAGAAA ACATTATTAA TGACATTTCA AAAAAAATTG GAAAACCAAT CAGAATTCGT TATCTTCCTA TCACATCACA AAATCGAATT CCTCTGTTGC AAAATAATAC TTATGATTTT GAGTGTGGTT CTACAACAAA CGATACTGCC CGTGGGAGAT CTGTAGCATT TGCTTATACA ACTTATGTTG AAGAAGTTCG AATTGCTGTT AAAAAAGACT CTGGCATTAA ATCTATCCAA GATTTAAATG GAAAAACAAT CGCTACGACC ACCGGAACAA CAGCTGTTCA GCTTATTCGT CAAAATGGAC GTGCAAAAAA CATTAACTTC AGAGTCATTA ATGGCAGAGA TCATGCAGAT AGCTTTTTGT TATTAGAATC CGGCCGTGCT GACGCGTTTA TTATGGACTC TTCAATTCTT GCTGGAAGTA TCTCTAGATC AAGAAATCCA TCTGATTATA TGATTCTTGA TGCTGTACTT TCAGTTGAAC CTATTGCTTG TATGCTCCGA TTAGAGGATA AAAATTTTGA ACAAGCAATC AATGATAGTA TCGTAAGCCA AATTAAAGAC GGTTCACTTG AAAAGTTATA CAACAAATGG TTTATGGAAC CAATCCCTCC TACAAATACT GTTGTAGGTC TTCCTTTATC AGAATCAATA AGACATGCTT GGGAAAATCC CAACAATAAA CCTAAAGAAG ATTATACAGA AAACAGCCTA TAA
|
Protein sequence | MDFSFLCLDD LTQMPVAGCL GTSGISHTYL DTLLDGFKNT AVLSISSLIL AVFVGVVIGT VRTLPNTSVI NNTFRAIGGI WVEIMRNIPL LVQVFLWYFV VPKIYPPAMN FSPIILITCA LGFFTSARIA EQVRSGIESI PSGQRYAAMA IGFTTYQSYR YIMIPRAIRT ILPPLTSVAH AQNDTLERIK QTGRITLGVR ESSGLAYALG NGRYTGFHTE MAENIINDIS KKIGKPIRIR YLPITSQNRI PLLQNNTYDF ECGSTTNDTA RGRSVAFAYT TYVEEVRIAV KKDSGIKSIQ DLNGKTIATT TGTTAVQLIR QNGRAKNINF RVINGRDHAD SFLLLESGRA DAFIMDSSIL AGSISRSRNP SDYMILDAVL SVEPIACMLR LEDKNFEQAI NDSIVSQIKD GSLEKLYNKW FMEPIPPTNT VVGLPLSESI RHAWENPNNK PKEDYTENSL
|
| |