Gene BARBAKC583_0631 details

Gene Information

• Locus tag: BARBAKC583_0631
• Symbol: ribD
• ID: 4684435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 651669
• End bp: 652793
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639841818
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_988935
• Protein GI: 121602090
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 0.20095
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AAGCACAAGA CTGTCGATTT ATGGCCGCAG CTATTCGTTT GGCAGAGCGT 
CATGTCGGCC TTACTAACGA AAATCCTTCT GTTGGTGCTT TAATTGTGCG AAATGATAGT 
ACAGGACCAT TTATTGTTGG CTATGGCGTA ACAGCTCTTC GTGGAAGACC CCATGCTGAA 
GTGCAGGCTT TGCAGATGGC GGGGCCATTG TCTAAAGGGG CTACTGCTTA TATTACCCTA 
GAGCCTTGCG TGCATTATGG AAAAACTTCA CCATGTGTTG ATTCACTTAT TGATGCAGGT 
ATTGCACGGG TTGTTATTGC TCTAATTGAC CCAGATGAGC GAGTTTGTGG TCGTAGTATT 
GCTCTTTTAC AAGCTGCTGA TATTGAAGTT GTTAAAGGGG TTTTAGAAAA AGAATCCTCT 
GAAATGTTAA GTGCTTATTT ATGTACCAAG AAGTTGAAAC GTTGTGAAGT AACTTTAAAG 
ATGGCAATCT CTGCAGATAA TGGTGTAGGA AAAAAAGGGC AGGGAGGGGT AAAAATTAGT 
GGAGCGACTT CTCATACATA TACACATATT TTGCGTGCTC AACATAATGC TATAATGGTT 
GGTATTCGCA CTATATTAGC AGATGATCCG CAATTAACTT GCCGTTTGCA AGGGCTTGAA 
ATGCGTTCGC CTATACGTGT TATTTTAGAC AAAGATTTAC GTATTCCAAT GGATGCAAAA 
GTTATTCAGA CAGCAACACA AGTTCCTACG TGGGTTATTT GTGATGCCAC TCTTTCAAAT 
CAAAGCAAAA AAATGAAATT AGAGCAATAT GGTGTATGTG TGCATTCGAT AGAAATAAGC 
AATAATTTTA TGCAACCTCT TGCTATTTTA CAACTTCTTT GTCAGCTTGG AATTAATAGC 
GTTTTGCTTG AAGGAGGAGC AGAGACAGGA GAAAAATTTT TAAATGCTGG TTGTGTAGAT 
CATTTAATAT GTTTTTATGC GTCAGTTATT TTAGGTGAAA ATCGTATTAA GGCTCCTTAT 
TTTGAAACTT ACCTTTCGGA ATTTAATGAA ATTGAGACGA AAATGTTAGA AAACGACCGT 
TTGCGTAGAT GGAGGCGTAA GATATTATGT TCACAGGGAT TGTAA 

 

Protein sequence

MNKKAQDCRF MAAAIRLAER HVGLTNENPS VGALIVRNDS TGPFIVGYGV TALRGRPHAE 
VQALQMAGPL SKGATAYITL EPCVHYGKTS PCVDSLIDAG IARVVIALID PDERVCGRSI 
ALLQAADIEV VKGVLEKESS EMLSAYLCTK KLKRCEVTLK MAISADNGVG KKGQGGVKIS 
GATSHTYTHI LRAQHNAIMV GIRTILADDP QLTCRLQGLE MRSPIRVILD KDLRIPMDAK 
VIQTATQVPT WVICDATLSN QSKKMKLEQY GVCVHSIEIS NNFMQPLAIL QLLCQLGINS 
VLLEGGAETG EKFLNAGCVD HLICFYASVI LGENRIKAPY FETYLSEFNE IETKMLENDR 
LRRWRRKILC SQGL