| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0572 |
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| Symbol | rpoC |
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| ID | 4684810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 582204 |
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| End bp | 586415 |
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| Gene Length | 4212 bp |
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| Protein Length | 1403 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639841762 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_988882 |
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| Protein GI | 121602241 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG AGGTTATGAA TCTTTTCAAT CCTCAAGCGC TAGCACAGAT ATTTGACTCT
ATTCGTATAT CGATTGCGAG TCCTGAAAAT ATTCTATCCT GGTCGTACGG TGAGATCAAA
AAGCCAGAAA CTATTAATTA CCGTACGTTT AAACCAGAGC GCGATGGTCT TTTTTGTGCG
CGTATATTTG GCCCTATTAA AGACTATGAA TGTCTTTGTG GCAAATATAA ACGTATGAAA
TACAAAGGCA TTATTTGTGA AAAATGTGGT GTAGAAGTTA CCCTTTCGCG AGTACGCCGT
GAGCGCATGG GGCATATTGA GCTTGCAGCG CCAGTTGCTC ATATTTGGTT TCTTAAATCA
CTACCAGGCC GCATATCTAC TCTTTTAGAT TTAACTTTGA AGGATATTGA AAGGATTCTG
TATTTTGAAA GTTATATTGT AACAGAACCC GGGTTAACAT CTCTTAAGCT ACACCAGCTT
CTTTCTGAAG AAGAATATAT GCTTGCTATT GATAAGTTTG GAGAAGATCA ATTCACGGCG
ATGATTGGTG CTGAGGCTAT TTATGATCTT CTCGCTGGGA TGGAGTTAGA TAAAATTGCG
AACGATTTGC ATGCTGAATT AGCAGAAACG ACTTCAGAGT TAAAGCAAAA AAAGCTCATT
AAGCGGCTTA AAATTGTTGA AAATTTTCTT GAATCTGGTA ATAAACCAGA ATGGATGATT
ATGAAAACAA TTCCGGTTAT TCCACCGGAT TTACGTCCGC TGGTTCCGCT TGATGGTGGA
CGTTTTGCAA CATCGGATTT AAATGATCTC TACCGGCGTG TTATAAATCG TAATAATCGT
TTGAAGCGGC TTATTGAATT GCGTGCTCCT GGAATTATTG TGCGTAATGA AAAACGTATG
GTGCAGGAAG CTGTTGATGC GTTATTTGAT AATGGCCGCC GTGGCCGTGT GATTACAGGG
GCAAATAAGC GTCCATTAAA GTCACTTTCA GATATGCTGA AGGGTAAACA GGGACGTTTC
CGTCAAAATT TACTTGGGAA GCGTGTTGAT TATTCAGGTC GTTCTGTTAT CGTGACGGGA
CCTGAATTGA AGTTGCATCA ATGCGGTCTT CCGAAAAAGA TGGCTCTTGA GTTGTTCAAG
CCATTTATTT ATGCGCGGCT TGATGCAAAG GGCTATTCAT CCACTGTGAA GCAGGCAAAG
AAGCTTGTTG AAAAAGAACA TCCAGAAGTT TGGGATATTT TGGATGAAGT TATTCGTGAA
CATCCTGTTT TGCTTAATCG TGCGCCGACA CTTCACCGTT TGGGGATTCA GGCCTTTGAG
CCCGTGTTGA TTGAGGGGAA AGCAATACAA CTTCATCCAC TCGTTTGTAC TGCTTTTAAT
GCAGATTTTG ATGGTGATCA GATGGCGGTT CACGTTCCGC TTTCGCTTGA AGCACAGCTG
GAAGCTCGTG TTTTGATGAT GTCGACTAAT AATATTCTTC ATCCAGCCAA TGGTGCGCCA
ATTATTGTTC CATCGCAAGA CATGGTTCTT GGTCTTTACT ATCTTTCGAT TGTTTCTGAA
AAAGAACCAG GAGAGGGGAT GGCTTTCGCT GATATGGGTG AGCTACATCA CGCTTTGGAG
AATAAAGTCG TAACTCTTCA TACGAAAATT AAAGGTCGTT TTAAAAATAT TGATAAAGAT
GGAAAAGAAG TTGCTCAACT CTACGATACG ACGCCTGGTC GTTTAATTAT TGGTGAATTG
TTGCCAAAAA ATCCAAATAT TTCGTTTGAT ATCGTCAATC AGGAAATGAC CAAAAAGAAT
CTTTCTAAGA TGATTGATCA AGTTTATCGG CATTGTGGGC AAAAAGAGAC AGTTGTTTTC
TGTGATCGTA TTATGCAACT TGGTTTTTCT CATGCATGTC GTGCTGGGAT TTCATTTGGT
AAAGACGATA TGGTTATTCC TGAGAGTAAG TCACGTCTGG TTGCAGAAAC GGAAGCTTTG
GTTAAAGAAT ATGAACAGCA ATATGATGAC GGTTTAATTA CACAAGGTGA AAAGTATAAT
AAGGTTGTTG ATGCGTGGGG TAAGTGCACT GATCGTATTG CAGATGAAAT GATGAAGGGG
ATTCAAGCTG TTAAATTTGA TCCTAAAACA GGTCGTCAGC AGAGAATGAA TTCGATTTAT
ATGATGTCGC ATTCTGGTGC ACGTGGTTCT GCTAATCAGA TGAGACAGTT AGCTGGTATG
CGTGGATTGA TGGCAAAGCC ATCAGGTGAA ATTATTGAAA CACCAATCAT TTCCAATTTT
AAGGAAGGTC TGACTGTTAA TGAGTATTTT AACTCAACGC ATGGTGCGCG TAAGGGGCTT
GCTGACACTG CGTTGAAAAC TGCTAACTCA GGTTATTTAA CACGGCGTCT TGTTGACGTT
GCCCAGGATG CTATTATTTC AGCAGTTGAT TGTGGTACTA TTAAGGGGCT TACCATGCAG
CCAATTATTG ATGCAGGACA AATTGTTGCA TCACTTGGTC AAAGAATTCT TGGTCGTACA
GCACTTCTTG ATATTTTGCA TCCAGTTTCT GGTGAAGTCA TTATTGAGGG AGGGACAATG
ATTGAGGAAG CTGATGTTCT TAAAATTGAA GAGGCTAGAA TTCAATCAGT TCAGATCCGT
TCTGCTTTGA CATGTGAGAC GCGTCTTGGT GTTTGCGCTA AATGCTATGG TCGTGATTTG
GCACGTGGAA CACCGGTTAA TCAGGGTGAA GCGGTTGGTG TTATTGCAGC TCAATCGATT
GGTGAACCAG GAACACAGCT TACTATGCGT ACTTTCCACT TAGGTGGAAC AGCGCAGGTT
GTTGACTCAT CTTATTTTGA ATCCTCTTAT GAAGGTATAG TAGAACTTCG TAATCGCAAT
GTTGTTCGCA ATTCTGAAGG GCATTTGGTT GTGATGGGAC GCAATATGGC TGTTCTTATC
AAAGATGAAA ACGGTAAAGA GCGTGCTGTT CATCGTATTA GCTATGGTGC GCGTCTCTTT
GTTGATGATG GTGATATTAT TAAACGTGGT CAGCGTATAG CTGAGTGGGA TCCTTACACT
CGTCCGATTC TAACTGAAGT TGATGGTTAT GTGGGGTTTG AAGATATGGT TGATGGTTTA
TCAGTTACTG AAACAACTGA TGAATCGACA GGAATTACAA AACGTCAGGT GATTGATTGG
CGTGTTAACC CACGTGGTGC TGATCTAAAA CCAGCAATGA TTATTCACTC AGATAAACAA
GGTAAGAATA TTGCTAAATT GCACAAAGGA GGAGAAGCCC GTTATGTGAT GTCAGTGGAA
ACTATTCTTT CTGTTGAACC TGGTTCGCAT GTTAAGGCAG GCGATGTTAT CGCACGCTTA
CCAATGGAAA GCGCCAAGAC AAAAGATATT ACAGGTGGTT TGCCGCGTGT AGCTGAGCTT
TTTGAAGCAC GGCGTCCAAA GGATCATGCT ATCATTGCTG AAATTAGTGG TACGGTTCGG
TTTGGTCGTG GTTACAAGAA TAAGCGTCGT ATTATTATTG AGCCTAATGA TGAGACACTT
GAACCAGTAG AATATTTGAT CCCAAAGGGT AAGTTGTTCC ATCTGCAAGA GGGTGATAAA
ATTGAAAAAG GTGATTATAT CTTAGATGGT AATCCAGCAC CTCATGATAT TTTGGCGATT
AAAGGTGTTG AAGCTTTGGC ATCTTATCTG GTTAATGAAA TTCAGGAAGT TTATCGTTTG
CAGGGTGTTT TGATTAATGA TAAACATATT GAAGTCATTG TTCGTCAGAT GTTGCAAAAG
GTTGAAATTA CTGAATCAGG AGATTCTGAT TATATTCCAG GTGACAATGT TGACCGCATT
GAATTAGACG AAATTAATGA TCATTTGATT GCAGAAGGTA AAAAACCTGC TTCTGGTACT
CCTATACTTC TTGGAATTAC GAAAGCATCT CTTCAGACAC CGTCCTTCAT TTCGGCAGCA
TCATTTCAGG AGACAACTCG GGTTCTTACT GAAGCAGCGG TTTCTGGCAA AATTGATACT
TTACAAGGGC TTAAGGAAAA TGTCATCGTC GGTAGGCTTA TTCCTGCAGG TACGGGTGGT
ACAATCGCTC AAATTCGTCG TATTGCTACT GTTCGTGATG ATTTGATTGT AGATGAACAG
CGCAAATCTA GCAATGATGG AATATCTAAA GCTATGTTAA CAGATATGAC AGCAAATGCG
GCCGCTGAAT AA
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| Protein sequence | MNHEVMNLFN PQALAQIFDS IRISIASPEN ILSWSYGEIK KPETINYRTF KPERDGLFCA
RIFGPIKDYE CLCGKYKRMK YKGIICEKCG VEVTLSRVRR ERMGHIELAA PVAHIWFLKS
LPGRISTLLD LTLKDIERIL YFESYIVTEP GLTSLKLHQL LSEEEYMLAI DKFGEDQFTA
MIGAEAIYDL LAGMELDKIA NDLHAELAET TSELKQKKLI KRLKIVENFL ESGNKPEWMI
MKTIPVIPPD LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLIELRAP GIIVRNEKRM
VQEAVDALFD NGRRGRVITG ANKRPLKSLS DMLKGKQGRF RQNLLGKRVD YSGRSVIVTG
PELKLHQCGL PKKMALELFK PFIYARLDAK GYSSTVKQAK KLVEKEHPEV WDILDEVIRE
HPVLLNRAPT LHRLGIQAFE PVLIEGKAIQ LHPLVCTAFN ADFDGDQMAV HVPLSLEAQL
EARVLMMSTN NILHPANGAP IIVPSQDMVL GLYYLSIVSE KEPGEGMAFA DMGELHHALE
NKVVTLHTKI KGRFKNIDKD GKEVAQLYDT TPGRLIIGEL LPKNPNISFD IVNQEMTKKN
LSKMIDQVYR HCGQKETVVF CDRIMQLGFS HACRAGISFG KDDMVIPESK SRLVAETEAL
VKEYEQQYDD GLITQGEKYN KVVDAWGKCT DRIADEMMKG IQAVKFDPKT GRQQRMNSIY
MMSHSGARGS ANQMRQLAGM RGLMAKPSGE IIETPIISNF KEGLTVNEYF NSTHGARKGL
ADTALKTANS GYLTRRLVDV AQDAIISAVD CGTIKGLTMQ PIIDAGQIVA SLGQRILGRT
ALLDILHPVS GEVIIEGGTM IEEADVLKIE EARIQSVQIR SALTCETRLG VCAKCYGRDL
ARGTPVNQGE AVGVIAAQSI GEPGTQLTMR TFHLGGTAQV VDSSYFESSY EGIVELRNRN
VVRNSEGHLV VMGRNMAVLI KDENGKERAV HRISYGARLF VDDGDIIKRG QRIAEWDPYT
RPILTEVDGY VGFEDMVDGL SVTETTDEST GITKRQVIDW RVNPRGADLK PAMIIHSDKQ
GKNIAKLHKG GEARYVMSVE TILSVEPGSH VKAGDVIARL PMESAKTKDI TGGLPRVAEL
FEARRPKDHA IIAEISGTVR FGRGYKNKRR IIIEPNDETL EPVEYLIPKG KLFHLQEGDK
IEKGDYILDG NPAPHDILAI KGVEALASYL VNEIQEVYRL QGVLINDKHI EVIVRQMLQK
VEITESGDSD YIPGDNVDRI ELDEINDHLI AEGKKPASGT PILLGITKAS LQTPSFISAA
SFQETTRVLT EAAVSGKIDT LQGLKENVIV GRLIPAGTGG TIAQIRRIAT VRDDLIVDEQ
RKSSNDGISK AMLTDMTANA AAE
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