| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0571 |
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| Symbol | rpoB |
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| ID | 4683812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 577891 |
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| End bp | 582042 |
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| Gene Length | 4152 bp |
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| Protein Length | 1383 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639841761 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_988881 |
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| Protein GI | 121602831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00509146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGA CTCTAGCAAT GATGTCTCAA TTCAATGGTC GTAAGCGCGT GCGCAAATTT
TTTGGTAAGA TTCCTGAAGT CGCAGAGATG CCGAATCTTA TTGAGGTTCA GAAAGCGTCA
TATGATCAAT TTCTCATGAT TAAAGAGCCG AAAGGTGGGC GTCCAGATGA AGGTCTGCAA
GCTGTTTTTA AATCGGTATT TCCTATTTCG GATTTTTCCG GTACAGCTAT GCTCGAATTT
GTGCGTTACG AATTTGATGC ACCAAAGTTT GATGTTGAAG AATGTCGTCA GCGCGATCTA
ACTTATGCAG CACCATTAAA GGTGATATTA CGCTTAATCG TATTTGATAT TGATGAAGAT
ACCGGTTCTA AAGATATTAA GGATATCAAA GAGCAGGGTG TCTATATGGG CGATATGCCT
TTAATGACGA GTAATGGTAC TTTTATCATT AACGGTACAG AGCGTGTTAT TGTTTCGCAG
ATGCATCGTT CTCCCGGTGT GTTTTTTGAT CATGATAAAG GAAAATCTCA TTCGTCAGGA
AAGGTTCTTT TTGCAGCCCG TGTAATTCCC TATCGTGGTT CTTGGTTAGA TATTGAATTT
GATGCGAAAG ATATCGTTTA TGCTCGCATT GATCGGAGAC GAAAGATTCC GGTTACTAGC
TTTCTGATGG CATTGGGTAT GGATGCATCG GATATTTTGT CAACCTTTTA TAATAAAGTT
ACTTATGAGC GGGTTGAAAG TGGGTGGCGT ATTCCTTATT CAGTGGATCG CTTTAAGGGA
GTAAAATTGG TTTCTGATCT TGTTGATGCA GAGAGTGGAG AGGTTGTTGC TGAGGCTGGT
AAAAAGCTAA CAGCTCGCAC TGCAAAGCTT TTAGTAGAAA AGGGTCTAAA GGCGATTAGA
GTCAGTGAAG ATGAATTATT AGGGTCTTAT TTAGCGGATG ATATCGTTAA TTATGAAACA
GGTGAGATTT ATCTTGAAGC TGGTGATGAA ATTGATGAAA AAGTATTAAA AGTTTTATTT
GATGTTGGTG CTAATCAAAT CAATATTCTT GATATTGATC ACATGAGTGT TGGAGCATAT
ATCCGCAATA CTTTAAAAGT AGATAAAAAT GAAAGTCGGC AAGATGCGTT ATTTGATATT
TATCGGGTGA TGCGTCCAGG AGAACCACCA ACAATAGATA CAGCGGAAGC TATGTTCCAC
TCGTTGTTTT TTGATTCTGA GCGTTATGAT CTTTCGGCTG TTGGTCGTGT TAAGATGAAT
TTGCGTATGG GGCTTGATTG CCCTGATACG GTTCGTGTTT TGCGTCAAGA AGATATTATT
GGTGTTGTTA AGATGCTGGT TGAATTGCGC GATGGCCGTG GTGAAATTGA TGATATCGAC
AATCTTGGTA ATCGTCGTGT TCGATCAGTT GGGGAATTGA TGGAAAATCA ATATCGGGTT
GGTTTGCTTC GTATGGAGCG TGCGATAAAG GAACGCATGT CTTCAGTTGA AATTGATACT
GTTATGCCAC AAGATTTGAT TAATGCGAAA CCAGCTGCGG CAGCTGTTCG CGAGTTTTTT
GGGTCTTCGC AATTATCGCA GTTTATGGAT CAAACTAATC CATTATCAGA AATTACTCAT
AAACGTCGTC TTTCTGCTCT TGGGCCAGGT GGTTTAACTC GTGAGCGTGC AGGTTTTGAA
GTGCGCGATG TGCATCCTAC GCATTATGGT CGTATTTGTC CGATTGAAAC GCCTGAAGGT
CCAAATATTG GATTGATTAA TTCTTTAGCG ACTTTTGCGC GAGTTAATAA ATATGGTTTC
ATTGAGAGTC CATATCGCAA AATTACCGAT GGTAAAGTGA CGACTGAGGT TGTTTATCTT
TCTGCTATGG AAGAAGCAAA ACATTATGTA GCTCAAGCCA ATTCTTCACT AGATTCAGAA
GGACGTTTCA CAGAAGAGTT TGTAGTTTGT CGTCATGCAG GTGAAGTTTT GATGGTGCCA
CGTGATCACA TAGATTTAAT GGATGTTTCA CCAAAACAGT TGGTTTCTGT AGCTGCTTCT
CTTATTCCAT TTTTGGAAAA TGATGATGCG AATCGTGCGT TAATGGGATC AAACATGCAA
CGTCAAGCAG TTCCATTGAT CCGTTCTGAA GCACCATTTG TTGGTACAGG TATGGAGGCA
ATAGTGGCTC GTGATTCAGG TGCTGCTATT AGTGCAAAAC GTGGTGGTAT TGTTGATCAA
GTTGATGCAA CACGTATTGT TATTCGTGCA ACAGAAGATT TAGATCCTTC AAAATCTGGT
GTTGATATTT ATCGCTTGCA AAAATTTCAG CGTTCCAATC AATCTACATG TATTAATCAG
CGTCCTCTTG TACATGTTGG TGACCGGATA GAAAAGGGTG ATATCATTGC TGATGGTCCA
TCAACTGATC TTGGTGATTT AGCTCTTGGG CGGAATGTTC TTGTAGCATT TATGCCTTGG
AATGGGTACA ATTACGAAGA CTCTATTTTG CTTTCTGAGC GTATCGTTGC TGATGATGTA
TTTACTTCGA TTCATATTGA AGAATTTGAA GTTGCTGCAC GTGATATGAA ACTTGGGCCG
GAAGAGATTA CTCGTGATAT TCCTAATGTT GCAGAAGAGG CATTAAGGAA TCTTGATGAA
GCTGGTATTG TCTATATTGG TGCTGAAGTT CAACCTGGTG ATATTTTGGT TGGTAAAATT
ACCCCAAAAG GCGAAAGCCC AATGACACCA GAAGAAAAGC TTTTGCGTGC AATTTTTGGT
GAAAAGGCCT CAGATGTTCG TGATACTTCT ATGCGAATGC CTCCAGGAAC TTTTGGGACT
GTTGTAGAGG TTCGTGTTTT TAACCGTCAT GGTGTAGAAA AAGATGAACG CGCAATGGAG
ATTGAGCGTG AAGAAATTGA GCGTTTAGCT AAAGATAGAG ATGATGAACA GTCGATTCTT
GATAGGAATG TTTATGCGCG TCTTGCAGGT ATGTTAAAAG ACAAGAGTGC AATAAGAGGT
CCAAAAGGGT TTGAAAAAGG CCAGAAAATT GATAGCACAG TACTGAATAA TTATCCACGG
TCACAATGGT GGCAATTTGC TGTTGATGAT GAAAAGGTTC AAAATAAAAT TGAAGCTTTG
TGCAATCAAT ATGATGAGTC GAAAGAGGCG TTACAACGTC GCTTTATGGA TAAGGTCGAA
AAAGTTCAAC GGGGCGATGA GATGCCTCCT GGCGTCATGA AAATGGTAAA AGTTTTTGTG
GCTGTGAAGC GCAAAATTCA ACCTGGTGAT AAAATGGCAG GACGTCACGG TAATAAGGGA
GTTGTATCGC GTATTCTTCC GGTGGAAGAT ATGCCATTTC TTGAAGATGG AACCCATGCT
GATATTGTAT TGAATCCATT AGGTGTTCCT AGCCGTATGA ATGTTGGTCA AATTCTTGAA
ACACATCTTG GTTGGGCATG CGCAGGTATG GGAAAAAAGA TTGGAGATTT GGTAGACTTT
TATCAAGAAA CTGGAGATAT ACTTCCTCTG CGTCAGCGTA TTGAAAATCT CATTCCTGAT
AATGATCGTA ATGAGCCAGT ACGTCAGTAT GATGATGAAA GTCTTGTTAA ATTGGCGCAT
CAGATGAGAA AGGGTGTTTC AATTGCAACG CCTGTTTTTG ATGGAGCGCA TGAAGCTGAT
ATTAATGCGA TGCTAGAAGA TGCAGGTTTA GATAGTTCTG GACAGGTTAC ACTTTATGAT
GGTCGTACTG GAGAGCCTTT TGATCGTCAG GTGACAGTAG GTTATATCTA TATGCTTAAA
TTGCATCATC TTGTTGATGA TAAGATTCAT GCTCGTTCAA TAGGACCTTA TTCACTTGTT
ACACAACAGC CATTAGGTGG TAAAGCGCAA TTTGGTGGTC AGCGTTTTGG TGAAATGGAA
GTTTGGGCTC TTGAGGCTTA CGGTGCTGCG TATACTTTGC AAGAGATGCT GACAGTTAAA
TCAGATGACG TAGCGGGTCG TACAAAAGTT TATGAAGCAA TTGTTCGTGG TGATGATACT
TTTGAAGCAA GTATACCTGA AAGCTTTAAC GTTCTGATCA AAGAAATGCG TTCACTTGGT
TTGAATGTAA AGCTTGGCGA TGCACGTGAA TTTATGGCGC AGCAAGCATT ACCTGAAGTG
GTAGAAAATT AG
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| Protein sequence | MAQTLAMMSQ FNGRKRVRKF FGKIPEVAEM PNLIEVQKAS YDQFLMIKEP KGGRPDEGLQ
AVFKSVFPIS DFSGTAMLEF VRYEFDAPKF DVEECRQRDL TYAAPLKVIL RLIVFDIDED
TGSKDIKDIK EQGVYMGDMP LMTSNGTFII NGTERVIVSQ MHRSPGVFFD HDKGKSHSSG
KVLFAARVIP YRGSWLDIEF DAKDIVYARI DRRRKIPVTS FLMALGMDAS DILSTFYNKV
TYERVESGWR IPYSVDRFKG VKLVSDLVDA ESGEVVAEAG KKLTARTAKL LVEKGLKAIR
VSEDELLGSY LADDIVNYET GEIYLEAGDE IDEKVLKVLF DVGANQINIL DIDHMSVGAY
IRNTLKVDKN ESRQDALFDI YRVMRPGEPP TIDTAEAMFH SLFFDSERYD LSAVGRVKMN
LRMGLDCPDT VRVLRQEDII GVVKMLVELR DGRGEIDDID NLGNRRVRSV GELMENQYRV
GLLRMERAIK ERMSSVEIDT VMPQDLINAK PAAAAVREFF GSSQLSQFMD QTNPLSEITH
KRRLSALGPG GLTRERAGFE VRDVHPTHYG RICPIETPEG PNIGLINSLA TFARVNKYGF
IESPYRKITD GKVTTEVVYL SAMEEAKHYV AQANSSLDSE GRFTEEFVVC RHAGEVLMVP
RDHIDLMDVS PKQLVSVAAS LIPFLENDDA NRALMGSNMQ RQAVPLIRSE APFVGTGMEA
IVARDSGAAI SAKRGGIVDQ VDATRIVIRA TEDLDPSKSG VDIYRLQKFQ RSNQSTCINQ
RPLVHVGDRI EKGDIIADGP STDLGDLALG RNVLVAFMPW NGYNYEDSIL LSERIVADDV
FTSIHIEEFE VAARDMKLGP EEITRDIPNV AEEALRNLDE AGIVYIGAEV QPGDILVGKI
TPKGESPMTP EEKLLRAIFG EKASDVRDTS MRMPPGTFGT VVEVRVFNRH GVEKDERAME
IEREEIERLA KDRDDEQSIL DRNVYARLAG MLKDKSAIRG PKGFEKGQKI DSTVLNNYPR
SQWWQFAVDD EKVQNKIEAL CNQYDESKEA LQRRFMDKVE KVQRGDEMPP GVMKMVKVFV
AVKRKIQPGD KMAGRHGNKG VVSRILPVED MPFLEDGTHA DIVLNPLGVP SRMNVGQILE
THLGWACAGM GKKIGDLVDF YQETGDILPL RQRIENLIPD NDRNEPVRQY DDESLVKLAH
QMRKGVSIAT PVFDGAHEAD INAMLEDAGL DSSGQVTLYD GRTGEPFDRQ VTVGYIYMLK
LHHLVDDKIH ARSIGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK
SDDVAGRTKV YEAIVRGDDT FEASIPESFN VLIKEMRSLG LNVKLGDARE FMAQQALPEV
VEN
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