| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0554 |
|---|
| Symbol | gatB |
|---|
| ID | 4683902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 567236 |
|---|
| End bp | 568735 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639841744 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_988867 |
|---|
| Protein GI | 121602274 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.00445667 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGA TTGATATTCG TCCACCTGAT CCTAGGCATT TTATTTCTGG ATCTACAGGT
GATTGGGAGG TTGTTATTGG CATGGAGGTT CATGCACAGA TTGTGTCGGA TTCGAAACTT
TTTTCGGGTG CATCGACCAA ATTTGGTGCT GAACCAAATA ATCATGTGTC GCTTATTGAT
GCAGCTATGC CTGGTATGTT GCCTGTTGTT AATCAAGAAT GTATTCGCCA AGCTATTCGA
ACTGGTTTAG GGCTAAAGGC TCAAATTAAT TTGAAGTCTG TTTTTGATCG TAAGAATTAT
TTTTATCCAG ATTTACCACA GGGATATCAG ATTTCACAGT TTCATTATCC GATTGTCGGT
GAAGGAAAAG TCACTATATC AATCGGGCCA GATTCAAATG GTCAATTTGA GGATGTTGAA
ATTGGAATTG AGAGGCTTCA TCTTGAGCAA GATGCTGGAA AATCAATACA TGATCAGCAT
CCAACAATGT CTTTTGTAGA TCTTAATCGT TCTGGTGTAG CCTTAATGGA AATTGTTTCC
AAGCCTGATA TGCGTTCATC AGAAGAAGCT AAAGCTTATA TAACAAAATT GCGGATGATT
CTTCGCTATT TGGGTACTTG TGATGGCAAT ATGGATGAAG GCTCTATACG TGCAGATGTC
AACGTATCAG TTCGCCGTCC TGGGGAGCCT TTGGGAACTC GTTGTGAAAT TAAGAATGTT
AATTCTATTC GTTTTATTGG TCAAGCGATA GAGTATGAAG CACGTCGTCA GATTGCAGTG
CTAGAAGATG GCGGTGTAAT AGATCCAGAG ACTCGGCTCT TTGATGCAGC TAAATGTGAA
ACGCGGTCTA TACGTTTAAA GGAAGAGGCT CATGACTATC GTTATTTTCC TGATCCTGAT
CTGTTGCCGT TGGAATTTGA TCAAGCGTTT GTTGATGCTT TAGCTTCAGA ATTGCCGGAG
CTTCCGGATG ATATAAAAGC GCGTTTTATC AATGACATGG GATTGACTGT TTATGATGCT
TCTATTCTCA TAACAGAAAA AGAAATTGCT GATTATTTTC AAAAAGTAGC ACGTGGGCGT
GATGGAAAAA TGGTTGCTAA TTGGGTGATC AATGATCTTT TAGGCGCTTT GAACAAAAAT
AATTGTAAAA TTGAAGATAC GCCAGTTAAA CCAGACCAAT TAGGAGCAAT TATTGATCTG
ATAGAAGAAG GGATTATTTC TGGAAAAATT GCCAAGGATT TATTTGAGAT TATTTGGCAT
GAAGGGGGGG ATCTACGTCA AATTGTGGAA GAACGTGGTA TGAAGCAGGT GACAGATACA
GGGGCTATTC AAAGCGCTGT TGATGAAATT ATGGCTAATA ACCCGGATAA AGTTTCTCAG
GCAAAAGAAA AACCTGCTTT AGTTGGTTGG TTTGTTGGGC AAGTTATGAA GGAAACAGGA
GGCAAAGCTA ATCCTCAAAC TGTTAATAAA CTAGTTAAAA TGAAACTTGA AATAGATTAA
|
|---|
| Protein sequence | MQMIDIRPPD PRHFISGSTG DWEVVIGMEV HAQIVSDSKL FSGASTKFGA EPNNHVSLID
AAMPGMLPVV NQECIRQAIR TGLGLKAQIN LKSVFDRKNY FYPDLPQGYQ ISQFHYPIVG
EGKVTISIGP DSNGQFEDVE IGIERLHLEQ DAGKSIHDQH PTMSFVDLNR SGVALMEIVS
KPDMRSSEEA KAYITKLRMI LRYLGTCDGN MDEGSIRADV NVSVRRPGEP LGTRCEIKNV
NSIRFIGQAI EYEARRQIAV LEDGGVIDPE TRLFDAAKCE TRSIRLKEEA HDYRYFPDPD
LLPLEFDQAF VDALASELPE LPDDIKARFI NDMGLTVYDA SILITEKEIA DYFQKVARGR
DGKMVANWVI NDLLGALNKN NCKIEDTPVK PDQLGAIIDL IEEGIISGKI AKDLFEIIWH
EGGDLRQIVE ERGMKQVTDT GAIQSAVDEI MANNPDKVSQ AKEKPALVGW FVGQVMKETG
GKANPQTVNK LVKMKLEID
|
|---|
| |