Gene BARBAKC583_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0401 
Symbol 
ID4684154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp400841 
End bp401593 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID639841594 
Producthemolysin A 
Protein accessionYP_988720 
Protein GI121601957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA TGAAAAGACT TGATGTCCTT TTAGTTGAAA AAAACTTTTT TACAACGCGT 
TCACGGGCAC GTGATGCAGT TGTGCGGCAA ACAGTTAAGG TTGATGGACA AATAGTTTCT
AAAGCCGGAA AAATGATTTC TGATGATGCA GAAATTATCG TGTGTGATCC TGCACAAAAC
TATGTTTCGC GCGCAGCATT AAAACTGATT GGTGCACTCG ATGCGTTTCC AGTTGTAACA
ACTCAAGTCA TTGCTCTTGA TATTGGTGCG TCGACAGGTG GTTTTACTCA GGTTCTTTTA
GAGCGTGGAG CCTCTCATGT TATCGCTGTT GACGTTGGTC ATAATCAATT TGATGCTTGT
TTATCTAACA ACAGTGCGGT AACCCTATTA GAAGGCTTGA ATGTTAGAGA TTTAAGACAG
GAACATTTAG GTGGTCGTGA AATTGATCTC ATTGTGTCAG ATGTAAGTTT CATTTCTCTG
AAGCTTGTCT TACCATCTGT TTTTGCTCTC ATTAAGAAAA AAGCTCAAGC TGTTTTGCTT
GTAAAACCTC AATTTGAAGT TGGTAGAGAA GGTATTGGTA AAGGTGGGGT GTTAAAAAAT
CCATCAATAG CAAAAAAAAC TGCTGAAGAA CTTTTTGATT GGTTGAATAC TCAAAAGGGA
TGGAAAGCAA AAGGCTTGAT TCCCTCTCCC ATTACGGGCA GTGATGGTAA TTTAGAATAT
TTGTTATTCG GAGAAAAAAG AATTGAGCAA TGA
 
Protein sequence
MAVMKRLDVL LVEKNFFTTR SRARDAVVRQ TVKVDGQIVS KAGKMISDDA EIIVCDPAQN 
YVSRAALKLI GALDAFPVVT TQVIALDIGA STGGFTQVLL ERGASHVIAV DVGHNQFDAC
LSNNSAVTLL EGLNVRDLRQ EHLGGREIDL IVSDVSFISL KLVLPSVFAL IKKKAQAVLL
VKPQFEVGRE GIGKGGVLKN PSIAKKTAEE LFDWLNTQKG WKAKGLIPSP ITGSDGNLEY
LLFGEKRIEQ