| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0393 |
|---|
| Symbol | ubiA |
|---|
| ID | 4684977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 392230 |
|---|
| End bp | 393234 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639841586 |
|---|
| Product | 4-hydroxybenzoate polyprenyltransferase |
|---|
| Protein accession | YP_988712 |
|---|
| Protein GI | 121602063 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 0.275276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATAAAAATAT TACACAAATT CAATCTTGTG AAAATCAGGG AAGAGTTATG
GATGCATCCT CTAAACAATG GGTCTACTCT TTCCTTCCTT CTTCTCTGTG GCTTTATGCC
CAATTAGCTC GTTGGGATAG GCCTATTGGA TGGAAATTGT TAATGTGGCC TTGTTTTTGG
TCAACAACTA TGGCTCTTCT TTCCTATGAA ATATCTCAAC AGCCTCTTTT ATCGGTAATG
ATTCATTGGA TTTGGTACCT TTTTCTTTTC TTTTTAGGTT CCATAGCTAT GAGAGGAGCA
GGCTGTACTT GGAATGATCT TGTCGACCAT GAAATTGATT CTCAGATAGA ACGAACGCGC
TCTCGGCCTC TGCCAGCTGG TCAAATAAGT CGGTTTCAGG CAAAAGTTTT TATATTGGTG
CAGTGTTTCG TGGGTTTAGG CGTTTTATTG CAGTTTAATA TGTTTAGTTT TTATTTAGGG
ATTTCATCAT TAGTAGCGGT TGCATTTTAT CCTTTTATGA AACGTATAAC AGATTGGCCA
CAATTTTTTT TAGGTATTGC ATTTAATTGG GGTGCATTAA TGGGATGGGC TGTTGTTTAC
GGGCGGTTGA GTTGGGCACC AATCGCACTT TACGCAGGAT CCATCTTATG GACGATTGGA
TATGATACAA TTTATGCTCA TCAAGATAGA AAAGATGATG CGATTGTTGG TGTACGTTCT
ACAGCGCGCC TCTTTGAAAA AAGCACTAAA CGTGCGCTGA TACTTTTGTA TAGTGGTTTT
TTAATACTGG TTAGCTTGGC ATTTTATTTA GCAAAGGTCC CCATTATAAG CTTTTTGGGG
TTATTTTGCG CGGGTGTCCA TATGTTTATT CAAATTAAAG CCATTGATAT AGATAATAGT
GAGCAATGCT TAAAGCTTTT TAAATCTAAT TCGTTTGTTG GCTTTTTCAT CTTTGCTGGT
TTGATATGCG GCGGTGCTTG GATGATACTT TACCCCGCTA TTTAG
|
|---|
| Protein sequence | MKKNKNITQI QSCENQGRVM DASSKQWVYS FLPSSLWLYA QLARWDRPIG WKLLMWPCFW
STTMALLSYE ISQQPLLSVM IHWIWYLFLF FLGSIAMRGA GCTWNDLVDH EIDSQIERTR
SRPLPAGQIS RFQAKVFILV QCFVGLGVLL QFNMFSFYLG ISSLVAVAFY PFMKRITDWP
QFFLGIAFNW GALMGWAVVY GRLSWAPIAL YAGSILWTIG YDTIYAHQDR KDDAIVGVRS
TARLFEKSTK RALILLYSGF LILVSLAFYL AKVPIISFLG LFCAGVHMFI QIKAIDIDNS
EQCLKLFKSN SFVGFFIFAG LICGGAWMIL YPAI
|
|---|
| |