| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0348 |
|---|
| Symbol | ugpA |
|---|
| ID | 4684101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 343422 |
|---|
| End bp | 344306 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639841541 |
|---|
| Product | glycerol-3-phosphate ABC transporter, permease protein |
|---|
| Protein accession | YP_988667 |
|---|
| Protein GI | 121602228 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA AATCTGCATA TTTTAAAAAT AGTTTACTCC CTTATTGGCT ACTTTTTCCT
CAGCTTTTTA TTATTTTCCT GTTTTTTATC TGGCCTGCAG TGCAAGCAAT AAAATCTTCT
TTTGAACGTG AAGACCCTTT TGGTTTTACA ACAACTTTCA TTGGCTTTGA AAATTACGTA
ACAGTTTTAT CTGATCCTTC TTATATAAAG TCACTTCTCA CAACTATAAT ATTTTCTACC
TCCGTTACTT TTGTTGCAAT GTCGATATCG CTTCTTTTAG CTGTCTCCGT TGATCGTGTG
ATCCGCGCAA AAAAAGCTTA TACTATCCTT TTACTTTGGC CCTATGCAGT TGCTCCGGTA
TTAGCAGGAA TATTATGGTT ATTTATTTTT CATCCAACTA TTGGAATTTT CCCTATTATC
CTTGAAAAAA TAGGAATTAT ATGGAACCAT CGTGTTAATG GAACACATGC AATGATCCTT
ATTGTGATTG CTGCAAGTTG GCAACAAATC TCTTACAATT TTCTCTTTTT TCTTGCTGGA
CTTCAATCCA TTCCGCGTTC TCAAATAGAA GCAGCAGCAA TTGATGGAGC TACCCCCTTT
AAGCGGTTTT GGACTGTAAT CTTCCCACAA ATTTCACCGA CAACCTTCTT CCTTCTTGTT
ATCAATATCA ATCATGTTAT GTTCGATACA TTTGGGATTA TTGATAACAT AACCTCTGGA
GGGCCTGCAC GTGCAACAAA TACACTTGTC TATAAAATCT ATGACGACGG TTTCAGAAAT
CATATAATTG GTGCGTCAGC AGCACAATCA ACACTATTAA TGCTGATGGT TATTATCTTA
ACATTTATCC AGTTTCGCTG GATTGAACGT CGCGTACAAT ATTAA
|
|---|
| Protein sequence | MQEKSAYFKN SLLPYWLLFP QLFIIFLFFI WPAVQAIKSS FEREDPFGFT TTFIGFENYV
TVLSDPSYIK SLLTTIIFST SVTFVAMSIS LLLAVSVDRV IRAKKAYTIL LLWPYAVAPV
LAGILWLFIF HPTIGIFPII LEKIGIIWNH RVNGTHAMIL IVIAASWQQI SYNFLFFLAG
LQSIPRSQIE AAAIDGATPF KRFWTVIFPQ ISPTTFFLLV ININHVMFDT FGIIDNITSG
GPARATNTLV YKIYDDGFRN HIIGASAAQS TLLMLMVIIL TFIQFRWIER RVQY
|
|---|
| |