Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0119 |
Symbol | ispG |
ID | 4683818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 133498 |
End bp | 134754 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639841319 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_988457 |
Protein GI | 121602019 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGG CCTATTATTT ATCGAAGCTT TCAGAACGTC GCCGGTCTGT TGCGGTGATG GTTGGGGATG TAGGGGTTGG CGGTGATCAT CCGATCGTTG TTCAATCTAT GACCAATACG GACACAGCTG ATATTGATGC TACAGTGATG CAAGTCAGTG CACTTTGGCG TGCAGGGTCA CAATTGGTGC GGATAACTGT TGACCGTGAT GAAGCAGCTG CCGCTGTTCC TAAAATACGG GAAAGGTTGG AACGATTGGG CATTTTTGTT CCTTTGGTGG GAGATTTTCA TTATATTGGG CATAAGCTTT TGGTTCAGCA TCCTGCATGT GCGCAAGCGC TGGCAAAATA TCGGATTAAT CCTGGCAATG TCGGTTTTGG TGCCAAAAAG GATCTGCAAT TTAGTCAGAT TATTGAGATC GCTTGCCAGT ATAATAAACC CATACGCATT GGGGTGAATT GGGGATCCCT AGATGAAGCG TTGTTGACGC AGCTTATGGA TGAAAATGCA CAACAAGAAA AGCCCTTATC AATGGCAGAA GTTATGCGGG AAGCCGTGAT TCAGTCTGCG CTTCATTCAG CCTTTGCTGC TGAAAAGATG GGTTTGGGAC GAGATAAGAT TATTCTGTCA GCAAAAGTAA GTGATGTGCA AGATCTTATT GCTGTATACA CTCTTTTAGC GAAGCGTTCT GACCATGCCC TTCATGTTGG GTTAACGGAA GCGGGTATGG GAACCAAGGG AGTGGTTGCT TCTTCTGCGG CTTTGGGCAT TCTATTACAA CAGGGGATTG GAGATACGAT TCGTATCTCA TTAACCCCTG AACCAGGGGG AGACCGTACC CGAGAAGTCA AAGTATGCCA AGAGCTGTTG CAAGTGATGG GGTTTCGGCA ATTTGTTCCT GTGGTTGCGG CATGTCCTGG ATGTGGGCGG ACGACGTCGA CGGTTTTTCA AACATTGGCG CAAAAAATCG AAGCTAATTT ATGTAAAAAT ATGCCAATTT GGCGTGAAAA ATACCCTGGG ATTGAACGCT TAAAAGTGGC TGTTATGGGC TGCATCGTCA ATGGACCTGG GGAATCAAAA CATGCTGATA TTGGTATTTC CTTACCCGGA ACAGGAGAGT TGCCAGCAGC CCCTGTATTT ATTGAAGGCA AAAAGGTAAA GGTGTTGCGC GGTCATCATA TTGCAGAAGA ATTTGAAGAG ATTTTGAGTG ATTATATCCG TACTCGCTTT GGACAGCATG AACAAAAAAG GGCTTAA
|
Protein sequence | MSTAYYLSKL SERRRSVAVM VGDVGVGGDH PIVVQSMTNT DTADIDATVM QVSALWRAGS QLVRITVDRD EAAAAVPKIR ERLERLGIFV PLVGDFHYIG HKLLVQHPAC AQALAKYRIN PGNVGFGAKK DLQFSQIIEI ACQYNKPIRI GVNWGSLDEA LLTQLMDENA QQEKPLSMAE VMREAVIQSA LHSAFAAEKM GLGRDKIILS AKVSDVQDLI AVYTLLAKRS DHALHVGLTE AGMGTKGVVA SSAALGILLQ QGIGDTIRIS LTPEPGGDRT REVKVCQELL QVMGFRQFVP VVAACPGCGR TTSTVFQTLA QKIEANLCKN MPIWREKYPG IERLKVAVMG CIVNGPGESK HADIGISLPG TGELPAAPVF IEGKKVKVLR GHHIAEEFEE ILSDYIRTRF GQHEQKRA
|
| |