Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0019 |
Symbol | dapF |
ID | 4684357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 20426 |
End bp | 21274 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639841219 |
Product | diaminopimelate epimerase |
Protein accession | YP_988358 |
Protein GI | 121602373 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAC CATTCAGCAA AATGAACGGT CTTGGAAATA AAATCATTGT CGCTGATTTG CGTAAAGCTA TACATAACAT CACACCACAG GCAATTCAGG CTTTAGCTTC AAACCCCCAA ACACACTTTG ATCAAATCAT GGCTATTCAT CCCCCAACTC AAGATGCGGA TTTCCGTATT GAAATATGGA ATGCCGATGG CTCAATGGCA AAAGCTTGCG GCAACGGTAC ACGCTGTGTC ATTGAATGGT TAGCCAATCA TAATTTAGGC AATAATTTTC GATTGGAAAC ATCGACTGGA ATTGTTGAAG GTAAACGCCA AACTGATGGC CTCATTTCTG TTGATATGGG GCGTCCATAT CTCAACGCAA AAGATATGCC TGTTTCACGT GAAATCATCG ATACTAATCA CGTAGATATT ACAGCTGGCC CCCTACAAGA CGCATGTCTT GTCTCCGTTG GTAATCTCCA CGCTATTTTT TTCATTGAAA GTAACATCCA AAACATACCA TTAGAAAAAT ATGGACCAAA GCTCGAACAT GATCCACTTT TTCCAGAAAG ATGTAATATT TCCATTGCTC AGATAACATC AAAGAAAAGT CTAACTTTAC GAACGTGGGA GCGAGGAGCT GGGTTAACAC AAGCATGCGG TAGCGCTGCT TGTGCAAGTG CAGTCGCTGC TTATCGCCGT GGATTAACAG AGCGCCACAT TGACGTTAAT CTACCAAAGG GTATACTCTC TATTCTCTAT CGAGATGATG AACATATCAT CATGACAGGC CCAACAGAGC ATGAATTTAG TGGACTTTTT AACCCTCTAA CGGGGACTTA TAAAAAGGAT CATCTTTGA
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Protein sequence | MKTPFSKMNG LGNKIIVADL RKAIHNITPQ AIQALASNPQ THFDQIMAIH PPTQDADFRI EIWNADGSMA KACGNGTRCV IEWLANHNLG NNFRLETSTG IVEGKRQTDG LISVDMGRPY LNAKDMPVSR EIIDTNHVDI TAGPLQDACL VSVGNLHAIF FIESNIQNIP LEKYGPKLEH DPLFPERCNI SIAQITSKKS LTLRTWERGA GLTQACGSAA CASAVAAYRR GLTERHIDVN LPKGILSILY RDDEHIIMTG PTEHEFSGLF NPLTGTYKKD HL
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