Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0009 |
Symbol | rho |
ID | 4685051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 9401 |
End bp | 10666 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639841209 |
Product | transcription termination factor Rho |
Protein accession | YP_988348 |
Protein GI | 121602564 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.000000017892 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA TGAAACTACA AGAACTTAAA AGTAAAAGCC CTGTTGAGCT TATCTCTTTT GCCGAAACAC TGGAAGTTGA AAACGCTTCA CTGATGCGTA AACAAGAATT GATGTTCGCC ATCTTGAAAA AGCTCGCTTT GCAAGACGTA GAAATTATTG GGGAGGGCGT TGTTGAAGTT TTACAAGATG GATTTGGATT TTTACGATCT GCTGATGCTA ATTATCTTCC AGGGCCTGAT GATATTTATA TTTTACCCTC ACAAATTCAA TCTTTTTCTC TAAAAACAGG GGATACTGTT GAAGGCCCTA TACGCGGTCC GAAAGAGGGA GAACATTATT TTGCTCTCCT TAAAGTGAAT AAAATAAATT TTGAAGATCC TGAGAAAATT CGCTATAAAA TTCATTTTGA CAATCTTACA CCTCTTTATC CAAATGAGCC TTTCCGAATG GAAATTCAAG ATCCTACGGA AAAGGATATA TCATCACGAA TTGTTGATTT AATATCTCCA CTAGGAAAAG GTCAGCGAGG ATTGATTGTA GCTCCTCCTA GAACAGGAAA AACAGTTTTA TTACAAAATA TAGCTCATTC TATTACAACT AATCACCCTG AATGTTATCT TATTGTTCTT TTGATTGATG AACGTCCGGA AGAAGTTACA GATATGCAGC GTTCTGTAAA GGGAGAAGTG GTTTCTTCTA CCTTTGATGA ACCGGCAATA CGTCATGTAC GTGTAGCTGA AATGGTTATT GAAAAAGCTA AGCGTTTGGT TGAATATGGG CGTGATGTTG TTATTCTTCT TGATTCAATT ACCCGTCTTG GGCGAGCGTA CAACACCGTT GTTCCTTCAT CAGGAAAGGT TTTGACAGGT GGTGTTGATG CCAATGCTTT GCAACGTCCA AAGCGCTTTT TTGGTGCAGC ACGTAATATC GAAGAAGGTG GATCTTTAAC TATTATTGCG ACAGCCCTAA TTGATACGGG TAGTCGTATG GATGAAGTTA TTTTTGAAGA ATTTAAAGGA ACAGGGAATT CGGAAATTGT TCTTGATCGT AAGGTTTCTG ACAAACGTAT TTTCCCAGCT ATGGATGTTT TAAAGTCAGG AACGCGTAAA GAAGATCTTT TAGTAGCACG TCAAGATTTG CATAAAATTT TCGTACTTCG TCGTATTTTA GCTCCGATGA ATATAACAGA TGCAATGGAA TTTTTGATTG ATAAATTGAA ACATACAAAA AATAATAGTG AATTCTTTGA TTCAATGAAT ACTTAG
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Protein sequence | MQEMKLQELK SKSPVELISF AETLEVENAS LMRKQELMFA ILKKLALQDV EIIGEGVVEV LQDGFGFLRS ADANYLPGPD DIYILPSQIQ SFSLKTGDTV EGPIRGPKEG EHYFALLKVN KINFEDPEKI RYKIHFDNLT PLYPNEPFRM EIQDPTEKDI SSRIVDLISP LGKGQRGLIV APPRTGKTVL LQNIAHSITT NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAI RHVRVAEMVI EKAKRLVEYG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP KRFFGAARNI EEGGSLTIIA TALIDTGSRM DEVIFEEFKG TGNSEIVLDR KVSDKRIFPA MDVLKSGTRK EDLLVARQDL HKIFVLRRIL APMNITDAME FLIDKLKHTK NNSEFFDSMN T
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