| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4155 |
|---|
| Symbol | |
|---|
| ID | 4671557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4440017 |
|---|
| End bp | 4441432 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639841193 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_988332 |
|---|
| Protein GI | 121596436 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTAG AACCCCAGCT CAGCCCCTCG CCCGAGGTGC ACGCCAGTGC GCGCCGCGCC
CCGGCCCCGC CCCCTGCCCT GCGCGTGGGC ATGATCGGCG CCGGCACCGT GGGCAGCGGC
GTGTGGCGGG TGCTGCGGCG CAACCGGGAC CTCATCAACG CACGCGCCGG GCGCGCCATC
GAGATCGTCG CGGTCGCCGC GCGCAACACC GCGCGTGCCG CTACGGCGCT GGACGGCGCG
CCCGGCGTGC GCCTGCTGGC CGACCCGCTG CAACTGGCCA CCGACCCCGG TGTGGACGTG
GTGCTGGAGC TGGCCGGCGG CACCGGCGCC GCACGCGACT GGGTGCAGGC CGCGCTGGTG
CATGGCAAGC ATGTGGTGAC CGCCAACAAG GCCCTGCTGG CCACGCACGG CGAGGCGCTG
GCGCAGACTG CCGCGCGCCA CGGCCGGGTG CTGGCCTATG AAGCGGCCGT GGCCGGCAGC
GTACCCGTGA TCAAGGCGCT GCGCGAAGGG CTGGCGGCCA ACCGCATCAC CGCGCTGGCA
GGCGTGCTCA ACGGCACCAG CAACTACATC CTCACGCGCA TGCAGGCGGC GGGCCTCGGC
TTTGCCGCCG CGCTCACCGA AGCCCAGGCA CTGGGCTATG CCGAGGCCGA TCCGGCCTTC
GACGTGGACG GCACCGACGC CGCGCACAAG CTGGCGCTGC TGGCCGCCAA CGCGTTCGGC
ATGCCGGTGC GGCTGGACGC CGTGCATGTC GAGGGCATCC GCGACCTGCA GCGGGGCGAC
GTGGCCGCCG CCGCGCATCT GGGCTACGCC GTCAAGCTGC TGGCCGTGGC CGAGCAGCAG
GAGTGCGAGG GCCGCGTGGC CATCCAGCTG CGCGTGCACC CGGCCCTGGT GCCCGCGCGG
CATTCGCTGG CGCTGCTGGA CGGCGCGACC AACGGGCTGC TGGTGCGCGG CGACGCAGCC
GGCAGCGCCT TTTTCAGCGG CGCGGGCGCC GGCGGCGAGC CCACGGCGAG CGCCGTGCTG
GCGGACCTGA TCGACCTGGC GCGCCTGCCG GCCGTTTCTT CCCCGACACC CACGGGCCCT
GGCGTGCCCA CACTGGGCAC CCACCGCCGC GCGGACGCCC CCGCCGTACT GCCGATGGCC
TCAGTGAAGA CGCCGCACCT GCTGCGCCTG CTGCCCGGTG CGGCCCTGTG CGAAACGGCA
GTGCTACGGG CGCTGGCGCG CGACGGCGTC ACGGTGCGGC GCCGCACGTG GGCGGCACCC
GTCACCCCGG GCGGAGCGCC CGAGTTGCTG CTGCTCACCG CGCCGACGCC CGATGCGCTG
GCCGCAGAGG CCACGGCGCG GTTGCAGACG CACACGGGTG CGCAGGTGCG GCGGCTGCGC
GTGGAGCTGT GCAGCGCCCT CACGGATGAA CAATAG
|
|---|
| Protein sequence | MFVEPQLSPS PEVHASARRA PAPPPALRVG MIGAGTVGSG VWRVLRRNRD LINARAGRAI
EIVAVAARNT ARAATALDGA PGVRLLADPL QLATDPGVDV VLELAGGTGA ARDWVQAALV
HGKHVVTANK ALLATHGEAL AQTAARHGRV LAYEAAVAGS VPVIKALREG LAANRITALA
GVLNGTSNYI LTRMQAAGLG FAAALTEAQA LGYAEADPAF DVDGTDAAHK LALLAANAFG
MPVRLDAVHV EGIRDLQRGD VAAAAHLGYA VKLLAVAEQQ ECEGRVAIQL RVHPALVPAR
HSLALLDGAT NGLLVRGDAA GSAFFSGAGA GGEPTASAVL ADLIDLARLP AVSSPTPTGP
GVPTLGTHRR ADAPAVLPMA SVKTPHLLRL LPGAALCETA VLRALARDGV TVRRRTWAAP
VTPGGAPELL LLTAPTPDAL AAEATARLQT HTGAQVRRLR VELCSALTDE Q
|
|---|
| |