| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4140 |
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| Symbol | |
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| ID | 4672207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4426146 |
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| End bp | 4427858 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639841178 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_988317 |
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| Protein GI | 121596421 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.555817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCCGCCGCAC CATCCTGTGG GTGATCTTTG GCTTTTCCAT GGTTCTGCTG
TGGGACAAGT GGCAGATCCA CAACGGCAAC AAGGCCACCT TCTTCCCCAC GCCGCCGGCG
CAGACGGCCA GCACGCCCGC GGTAGCGGCC TCCGGCGCTG GCGCTGCCGA CGTGCCGGTG
GCCGCCGCCA GCGCCACGCC GGGCGCGGCG GCGCAGCCGC CCGCAGGCGC CAGCGTGCCG
CCTGCCGCCG CCATCCCGCG CAAGCGTGTG ACGGTGAGCA CCGACGTGCT GCGCCTGAGC
TTTGACTCCG AAGGCGGTTC GCTGGTCCAC GGAGAGCTGC TGCAATATCC CGAGATGGAG
GACAAGACCA AGCCCTTCCT GCTGCTGGAC GAGAGCGCTT CGCGTGTCTA TGTCGCGCAG
ACGGGCCTCA TCGGCAACGG TGCCGGCGGC GCCTTCCCCA CGCACAAGAC CCCCATGGCG
GTCGTGCCCG GTCCGCGCGA ACTGCAGGAC GGCCAGAACG AGCTGACCGT GCGTTTCGAG
TCGGCCGACA TGGGCGGTGT GAAGCTGGTC AAGACCTGGA CGCTCAAGCG CGGCGCCTAC
GACGTGGCCG TGAAGCACGA GGTGGTCAAC ACGGGCACGG CCCCGGTATC GCCCCAGCTG
TACCTGCAGT TGGCGCGCGA TGGCAACAAG CCGGCGGGCG AGTCGTCGTT CTACTCCACG
TTCACCGGTC CGGCCGTGTA CACCGAGGCG AAGAAGTACC ACAAGGTGGA ATTCAAGGAC
ATCGAGAACG GCAAGGCCGA GATCGACAAG TCTTCCAGCG ACGGCTACGT GGCCATGGTG
CAGCACTACT TCGCCACCGC GTGGCTGCTG GGCGACGGCG TGCAGCGCGA CAATTTCGTG
CGCAAGGTGG ACACCAACCT GTACTCGGTG GGCATGATCA CGCCGCTGGG CGAGATCGCC
CCCGGCCAGT CGAAGGCCGT GGACGCGCGC CTGTTCGCCG GCCCGCAGAT CGAGACGCTG
CTGGAAAAGC TGGCCCCGGG CCTGGAGCTG GTCAAGGACT ATGGCTGGCT CACCATCCTG
GCCAAGCCGC TGTACTGGCT GCTGGACCAG TTGCACAAGG TGATCGCCAA CTGGGGCTGG
TCCATCGTGG CGCTGGTGTT CCTGTTGAAG ATCGCGTTCT ACTGGCTCAA CGCCAAGGCC
TACGCCAGCA TGGCCAAGAT GAAGGCCATC AACCCGCGCA TCATGGAAAT GCGCGAGCGC
CTGAAGGACA AACCCCAGCA GATGCAGCAG GAGATGATGC GCATCTACCG CGAGGAGAAG
GTCAATCCCA TGGGCGGCTG CCTGCCCATC ATGATCCAGA TCCCGGTGTT CATTGCGCTG
TACTGGGTGC TGCTGTCCAG CGTGGAGATG CGCAATGCGC CGTGGATCGG CTGGATCAAG
GACCTGTCCT CGCCCGACCC ATTCTTCATC CTGCCGCTCC TGATGACGCT CTCGTCGCTG
CTGCAGACGG CGCTGAACCC CGCGCCGCCG GACCCGATGC AGGCCAAGAT GATGTGGCTG
ATGCCGCTGA TGTTCAGCGT GATGTTCTTC TTCTTCCCGG CCGGCCTGGT GCTGTACTGG
CTGACGAACA ACATCCTGTC GATCGCGCAG CAGTGGATCA TCAACACCCG CATGGGCGTG
CCGCCGCAGT TCAACCTGCC CAAGTTCCGC TGA
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| Protein sequence | MNDIRRTILW VIFGFSMVLL WDKWQIHNGN KATFFPTPPA QTASTPAVAA SGAGAADVPV
AAASATPGAA AQPPAGASVP PAAAIPRKRV TVSTDVLRLS FDSEGGSLVH GELLQYPEME
DKTKPFLLLD ESASRVYVAQ TGLIGNGAGG AFPTHKTPMA VVPGPRELQD GQNELTVRFE
SADMGGVKLV KTWTLKRGAY DVAVKHEVVN TGTAPVSPQL YLQLARDGNK PAGESSFYST
FTGPAVYTEA KKYHKVEFKD IENGKAEIDK SSSDGYVAMV QHYFATAWLL GDGVQRDNFV
RKVDTNLYSV GMITPLGEIA PGQSKAVDAR LFAGPQIETL LEKLAPGLEL VKDYGWLTIL
AKPLYWLLDQ LHKVIANWGW SIVALVFLLK IAFYWLNAKA YASMAKMKAI NPRIMEMRER
LKDKPQQMQQ EMMRIYREEK VNPMGGCLPI MIQIPVFIAL YWVLLSSVEM RNAPWIGWIK
DLSSPDPFFI LPLLMTLSSL LQTALNPAPP DPMQAKMMWL MPLMFSVMFF FFPAGLVLYW
LTNNILSIAQ QWIINTRMGV PPQFNLPKFR
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