| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4139 |
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| Symbol | |
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| ID | 4672212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4424429 |
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| End bp | 4426015 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639841177 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_988316 |
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| Protein GI | 121596420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.414652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAC GTACCACCTT CAAACTGGGC TTGCTGGGGG CCGCCGTGCT CGTGGCCATG
GGCACCGCCC ACGCCGCCAC CATGCGCTGG GCCGGCGCCA ACGACATCCT CACCGTGGAC
CCCCACGCGC AGAACCACCA GACCACGCAC GCCTTCCTGC AGCAGGTGTA CGAGAGCCTG
GTGCGCTATG ACGACAAGTA CCAGATCGAG CCCGCGCTGG CCACCAAGTG GACGCAGGTC
TCCCCCACAC AGGTGCGTTT TGAACTGCGC AAGGGCGTGA AATTCCATGA TGGTGCGCCA
TTCACGGCCG ATGACGTGGT GTTCTCGCTC ACGCGCGCCG GCACGGCGCC GTCCAACATG
ATGTCCGCGG TGCAGAGCGT CAAGGAAGTC AAGAAGGTGG ACGAGCACAC CGTGGACGTG
TTCCTCAAGG GCCCCAATCC CATCCTGCTG CGCGAGCTGA CCGAAGCGCG CATCATGAAC
AAGGCCTGGG CCGAGAAGCA CAACTCGGTG AAGTCGCAAG ACTACGCGGG CAAGGAAGAG
AACTACGCCT CGCGCAACGC CAACGGCACG GGCCCCTTCG TCATGGTGGG CTGGCAGCCG
GACGTGAAGG TCACGCTCAA GAAGAACCCC AACTGGTGGG ACAAGCCCAA GGGCAACATC
GACGAGGTGG TGTTCACCCC CATCAAGTCG GCCGCCACGC GCTCGGCCGC GCTGATCTCG
GGGCAGGTGG ACTTCGTGGT CGACCCGCCG CCGCAGGACC TGGCGCGCAT GAAGGCCAAC
CCCGACATCA AGCTCATCGA AGGGGCCGAG AACCGCACCA TCTACCTGGG CCTGGACCAG
TTCCGCGACG AGCTGCCCGG CGCGGGCACG GCCGGCAAGA ACCCGCTCAA GGACAAGCGC
GTGCGCCAGG CGCTGTACCA GGCCATCGAC TCTGCGGGCC TGCACAGCCG CACCATGCGC
AACCTGTCGG TGCCTGCGGG CACCATGATC GCTCCCATGG TGCATGGCTG GACCAAGCAA
CTGGACGAGC GTGCCGCCAA GTACGACGTG GAGGCCGCCA AGAAGCTGCT GGCCGACGCC
GGCTACCCGA ACGGCTTCTC GCTCAAGCTC GACTGCCCGA ATGACCGCTA CGTGAATGAC
GAGGCCATCT GCCAGGCCGT CACGGCCATG TGGACGCGCA TCGGCGTCAA GACCAACCTG
CAAACCGCGC CTATGGCGCA GTTCGTCACC CGCGTGATGA ACAACGACGT GAGCGCCTAC
CTGTTCGGCT GGGGCGTGGC CACGTTCGAC GCGCTGTATT CGCTGGACTC GCTGATGTCT
ACCAAGGACG GCAAGACCTC GGCTGGCGTC TACAACGGCG GGCGCTTTTC CGACGCCAAG
CTCGACGGCA TGATCCAGCA GATCAAGGTC GAGATGGATG CCCCCAAGCG CGACGCGCTG
ATCAACGACG CGCTCAAGCT GGTCAAGGAC GAGTACTACT ACCTGCCCCT GCACCACCAG
ATCCGCCCCT GGGCGATGCG CAAGAACGTG GACACGCCGC ATCGCGCGGA CGATCGCCCC
ATGCCCGCGT GGACGACCAT CAAGTGA
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| Protein sequence | MIQRTTFKLG LLGAAVLVAM GTAHAATMRW AGANDILTVD PHAQNHQTTH AFLQQVYESL
VRYDDKYQIE PALATKWTQV SPTQVRFELR KGVKFHDGAP FTADDVVFSL TRAGTAPSNM
MSAVQSVKEV KKVDEHTVDV FLKGPNPILL RELTEARIMN KAWAEKHNSV KSQDYAGKEE
NYASRNANGT GPFVMVGWQP DVKVTLKKNP NWWDKPKGNI DEVVFTPIKS AATRSAALIS
GQVDFVVDPP PQDLARMKAN PDIKLIEGAE NRTIYLGLDQ FRDELPGAGT AGKNPLKDKR
VRQALYQAID SAGLHSRTMR NLSVPAGTMI APMVHGWTKQ LDERAAKYDV EAAKKLLADA
GYPNGFSLKL DCPNDRYVND EAICQAVTAM WTRIGVKTNL QTAPMAQFVT RVMNNDVSAY
LFGWGVATFD ALYSLDSLMS TKDGKTSAGV YNGGRFSDAK LDGMIQQIKV EMDAPKRDAL
INDALKLVKD EYYYLPLHHQ IRPWAMRKNV DTPHRADDRP MPAWTTIK
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