Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4121 |
Symbol | |
ID | 4672721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4404692 |
End bp | 4406155 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639841159 |
Product | peptidase M20 |
Protein accession | YP_988298 |
Protein GI | 121596402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC GCCTGCCCGC CGCCGCCCTG GATGCCGCAC TCGCGCTGGA ACGCGTGGGG CGGGTGTGGG ACGAAGACAT CCTGCGGCAG CTCACCGACT ACATCCGCAT TCCCGCCAAG TCACCGGGCT TTGCGCCCGA CTGGCGCGAA CAGGGCCACC TGGAGACCGT GCTGCGCAAC GCCGCGCAGT GGGTCGAGGC GCAAAAGGTG GCGGGCCTGC AGTTGGAGAT CGTGCGCCTG CCGGGGCGCA CGCCGGTACT GTTCTTCGAG GTGGCGGCCA CCCAGCCGCG GTCCACGCAG ACCGTGCTGA TGTACGGCCA CCTGGACAAG CAGCCCGAAT TCGAGGGCTG GCGCAGCGAC CTGGGCCCGT GGACACCCAA GTACGAGGAC GGCAAGCTCT ACGGCCGGGG CGGCGCCGAC GACGGCTACG CGGTCTACGC CAGCGTGGCC GCGGTGCAGG AGCTCAAGCG CCAGAACGTG CCGCACCCGC GCATCGTGGG CCTGATCGAG ACCTGCGAGG AGAGCGGCTC CGCCGACCTG CTGCCTTACA TCGACGCGCT GAAGACCCGC CTGGGCGACG TGGCGCTGGT GATCTGTCTC GACTCGGGCG CGGGCAACTA CGACCAGCTG TGGCTCACCA CCAGCCTGCG CGGCATGGCC AGCGGCACGC TCAAGGTCCA GATCCTCACC GAGGGGGTGC ACTCGGGCGA CTCATCGGGT CTGGTGCCGT CGTCGTTTCG CATCATGCGC CAGGTGCTCG ACCGGCTGGA GGACTCGGCC ACGGGCCGCC TGCTGCCTGC GCACTTCCAC TGCGAGGTGC CACCCGACCG CCTGGCGCAG GCGCGGGCCA CCGCCGCCAT CCTGGGCGAC GAGGTCTACA AGCGTTTCCC CTGGGCGCAT GCCGATTGCG GTGGCAGCAC GGTGTTTGCC CTGCCCACCA CCACCGACCC GGTACAGGCG CTGCTCAAGC GCACCTGGGA GCCCACGCTC AGCGTGACGG GGGCCGAGGG CTTCCCCGCC CTCAAGGACG CGGGCAACGT GCTGCGCCCC TACACGGCCT TCAAGCTGTC GTTGCGCCTG CCGCCGCTGG TGGACGCCGC CGCCTGCCTG CAGGAGATGA AGGCCGTGCT GGAGGACAAC GCACCCTACC AGGCCAAGGT CACCTTCGCC CCCGATGGCG CGGCCAGCGG CTGGAACGCC CCGGCCATCA CGCCGTGGTT CGAGCAGGCG CTCAACGCCG CGAGCCAGGC GCACTTCGGC GCGCCTTGCG GCTACATCGG CCAGGGCGGC ACGATTCCGC TCATGAACAT GCTGAGCCGC GGTTTCCCGA CGGCGCAGAT GATGGTCTGC GGCGTGCTCG GCCCCAAGAG CAATGCCCAC GGCCCCAACG AGTTCCTGCA CGTGCCCTAC GCCAAGAAGC TCACCGCGGC CGTGGCGCAG GTGATCGCCA GCATGCCGGC CTGA
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Protein sequence | MNDRLPAAAL DAALALERVG RVWDEDILRQ LTDYIRIPAK SPGFAPDWRE QGHLETVLRN AAQWVEAQKV AGLQLEIVRL PGRTPVLFFE VAATQPRSTQ TVLMYGHLDK QPEFEGWRSD LGPWTPKYED GKLYGRGGAD DGYAVYASVA AVQELKRQNV PHPRIVGLIE TCEESGSADL LPYIDALKTR LGDVALVICL DSGAGNYDQL WLTTSLRGMA SGTLKVQILT EGVHSGDSSG LVPSSFRIMR QVLDRLEDSA TGRLLPAHFH CEVPPDRLAQ ARATAAILGD EVYKRFPWAH ADCGGSTVFA LPTTTDPVQA LLKRTWEPTL SVTGAEGFPA LKDAGNVLRP YTAFKLSLRL PPLVDAAACL QEMKAVLEDN APYQAKVTFA PDGAASGWNA PAITPWFEQA LNAASQAHFG APCGYIGQGG TIPLMNMLSR GFPTAQMMVC GVLGPKSNAH GPNEFLHVPY AKKLTAAVAQ VIASMPA
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