Gene Ajs_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4120 
Symbol 
ID4672947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4403802 
End bp4404677 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID639841158 
Productalpha/beta hydrolase fold 
Protein accessionYP_988297 
Protein GI121596401 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.848417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.810632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAC TGAGCGAACC CACGCTGCGC CCCTTCACCG CCAGCGACGG CGAGAACCTC 
GCCGTACAGG ACTGGCCGCT GCCCGCGCAG GAGCGCCGCG GCGCCGTGCT GCTGGTGCAC
GGCCTGGGCG AGCACGCGGG GCGCTACGAG GCCCTGGCCC AGCGCCTGAA CGGCTGGGGC
TTCAGCGTGC GCGGCTACGA CCACTACGGC CACGGCGACT CCGGCGGGCC GCGAGGCGGC
CTCACCAGCG ACCTGCGCCT GCTGGCCGAC CTGGCGGACC TGGTGGACGC CACACGCACG
CGGCTGCGGC CCTGCGAGCC GCTGGTGCTG CTGGGCCACA GCATGGGCGG GCTGGTGGCG
GCGAGCTTCG TGGCGCGGGG CGTGCGCCCC GTGGATGCGC TGGTGCTCTC GTCGCCCGCG
CTGGCCACTT TCATGAACCC GCTGCAAAAG CTGCTGCTGG CCACGCTGCC CCGGCTGGTG
CCCAACCTGC GCGTGGGCAA CGGCCTGAAC CCCGAACACC TGTCGCACGA CCCGGCCGTG
GTGGCCGCCT ACCGGGCCGA CCGGCGTTGC CACGACCGCA TCAGCGCGCG GTTGGCGCGC
TTCATTGCCG ATGCCGGCCC CGCCACGCTG GCGCGCGCCG CGCGCTGGAC GGTTCCTACG
CTGCTGCTGT GGGGCGAGGA CGACCGCATC GTCAATCCCG CGGGCAGCCG TGCCTTCGCG
GCAGCGGCGC CCCCGGCCGT GGTGCATGCC CAGGGCTTTG CGGGGCTGTA CCACGAGATC
TTCAACGAGC GCGACGCGGC GCCCGTGTTC GCGCAATTGG AATCGTGGCT GGAGCAGCGC
TGCCCGGTGC GCCGGGCGCA GCCCGTGGCG GCTTGA
 
Protein sequence
MQELSEPTLR PFTASDGENL AVQDWPLPAQ ERRGAVLLVH GLGEHAGRYE ALAQRLNGWG 
FSVRGYDHYG HGDSGGPRGG LTSDLRLLAD LADLVDATRT RLRPCEPLVL LGHSMGGLVA
ASFVARGVRP VDALVLSSPA LATFMNPLQK LLLATLPRLV PNLRVGNGLN PEHLSHDPAV
VAAYRADRRC HDRISARLAR FIADAGPATL ARAARWTVPT LLLWGEDDRI VNPAGSRAFA
AAAPPAVVHA QGFAGLYHEI FNERDAAPVF AQLESWLEQR CPVRRAQPVA A