Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4114 |
Symbol | |
ID | 4673413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4395926 |
End bp | 4396654 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639841152 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_988291 |
Protein GI | 121596395 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGTT TTCACTGCCC CCTGCCCCTG GCCGCTGATG CGCTGCTCAC GCTGCCGCCG ACGGCCGCGC GCCATGTGCA GGTGCTGCGC CTGCAGCCGG GCGACGCGGT CACGCTGTTC AACGGCGAGG GCGGCGAGTG GAGCGCCACC GTCACCCACA TGGGCCGCAG CGATGTGCAG GTGCAGGTCG GCAGCCACAG CGCCGTGGAG CGCGAGGCCG CGCGCGCCGT GCACCTGGTG GTGGGCATGC CCGCCAACGA GCGCATGGAC TGGCTGGTGG AAAAGGCCAC CGAGCTGGGT GCCGCGAGCA TCCAGCCGAT TGCCGCGGCA CGCAGCGTGC TCAAGCTGTC CGGCGAGCGC GCCGCCAAGC GCCAGCAGCA CTGGCAGGCG ATTGCCGTGG CGGCCTGCGA GCAATGCGGG CGCAACCGCG TGCCCTCCGT GCACGCGCCG CTGTCCCTGG CCGACTGGCT GCGCCAGCCC CCTGCCGACG CACTCGCCCC CGACGCGGCG CGCCTGCTGC TGTCGCTGCG CAGCGGCAGC CGCCCGCTGC GGGAAGCCGC GGCCCAGGGC GGCGCCGTCT GGGTGCTGCA CGGCCCCGAG GGCGGCCTGA CCGCGCAGGA GGAAGACGCC GCGCTGGCCC AGGGCTTTGC GCCGGCCAGC CTGGGCGCGC GCGTGCTGCG GGCGGAAACT GCCTCGGTGG CGGCACTGGC GCTGCTGGGG CTGGCCTGA
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Protein sequence | MPRFHCPLPL AADALLTLPP TAARHVQVLR LQPGDAVTLF NGEGGEWSAT VTHMGRSDVQ VQVGSHSAVE REAARAVHLV VGMPANERMD WLVEKATELG AASIQPIAAA RSVLKLSGER AAKRQQHWQA IAVAACEQCG RNRVPSVHAP LSLADWLRQP PADALAPDAA RLLLSLRSGS RPLREAAAQG GAVWVLHGPE GGLTAQEEDA ALAQGFAPAS LGARVLRAET ASVAALALLG LA
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