| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4094 |
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| Symbol | |
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| ID | 4674144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4370382 |
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| End bp | 4371947 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639841134 |
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| Product | spermidine synthase |
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| Protein accession | YP_988273 |
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| Protein GI | 121596377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.392732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.362775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC CTGGCGGCGC CCCTGGCATC ACAACCCCGG CCGTACCCCT GCCGGGCCCC
CGCCCCATCG ACATCGCGCT GCTCGCCAGC GTGTTCGTGG TGGCCGCCTG CGGCCTGCTG
TACGAGCTGG CGGCCGGGGC GCTGGCGTCG TATGTGCTGG GCGACTCGGT GCTGCAGTTC
TCCACCGTCA TCGGTACTTA CCTCTTCGCG ATGGGCGTGG GGTCGTGGCT CTCGCGCTAC
TTCGATCGGC AGTTGCCCGC GCATTTCCTG CGCATCGAGT TGCTGGTGGC GCTTATCGGC
GGGGCGCTGC CTGCCGTGCT GTTCCTGGCC AATGCCTACG TGCCCAGTGC GTTCCGCGTG
CTGCTGTACG GCATGGTGCT GCTGGTGGGC ACGCTGGTGG GCTTGGAGAT CCCGCTGGTC
ATGCGCATCC TGAAGCGCAA CGTGCAGCTC AAGGACCTCG TGAGCCAGGT GCTCACTTTC
GACTACCTGG GCGCGCTGGC CGTGTCGATG GCGTTCCCTT TGCTGCTGGT GCCGCAGTTG
GGGCTGGTGC GCACGGGGCT GCTGTTCGGC TTCATGAACG CGGCCGTGGC CGTGTGGGCG
CTGTGGCTGT TCCGGCATGA GCTGCGGCGC TTTGGCGCGC ACGCGCTGGC CTGTGCGCTG
GTGCTGGCGG CCCTGCTGGC GGGGCTGCTG GGGGCCGAGC ACATCACGCG CTTTGCCGAG
GACAAGTTCT ACCAGGACCG CATCGTGCTC AGCAGCGCCT CGCCCTACCA GCGCATCGTG
GTCACGCACG GGCGCGCGGG GCATCGCCTG TACCTGAACG GCAACCTGCA GTTCGCCGAG
CGCGACGAAT ACCGCTACCA CGAGGCCCTG GTGCACCCCG TGATGGCCGC GCACGGTCAT
CCGAAGCGCG TGGCGGTGCT CGGCGGCGGC GACGGTATGG CCGTGCGCGA GGTGCTCAAG
TACCCCTCGG TGGAGTCGGT CACCCTGGTC GAGCTGGACC CGGCGATGAC GCAGCTCTTC
GGCAGCCACC CCACGCTGCG GCAGCTGAAC GGCGATGCGC TGGCGTCACG CAAGCTCACC
ATCGTCAACA CCGATGCCTT CCAGTGGCTG CAACAGGGAG ATGACACCTA TGACGTGATC
GTGGTGGACT TTCCCGACCC CACCAACTTC GCCATCGGCA AGCTCTACAC CAACAGCTTC
TACGCCCTGC TGGACCAGCG CCTGGCCGCC AGCGGCTACG CGGTGGTGCA GACGACCTCG
CCGCTGGTGG CGCGCAGGAG CTTCTGGACG GTGGTCACGA CCATCGAGTC CGTGGGCCTG
CAGGCGCGGC CCTACCACGC GCATGTGCCG AGCTTTGGCG AGTGGGGCTT CGTCATCGCC
AGCCGCCGCC CCTGGCGCGT GCCGGCCGAG CTGCCCGCGG GGTTGCGCTT CCTGGACGCG
GCCGCGCTGC CCCTGCTGTT CGACTTCCCG CGGGACATGG CGCGCGTGCC CGCCGAGGTC
AACCGCCTGT CCAACCAGGT GCTGGTGCAC ACCTACGAAC AGGAGTGGGG CCAGGTCGCC
CACTGA
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| Protein sequence | MSTPGGAPGI TTPAVPLPGP RPIDIALLAS VFVVAACGLL YELAAGALAS YVLGDSVLQF
STVIGTYLFA MGVGSWLSRY FDRQLPAHFL RIELLVALIG GALPAVLFLA NAYVPSAFRV
LLYGMVLLVG TLVGLEIPLV MRILKRNVQL KDLVSQVLTF DYLGALAVSM AFPLLLVPQL
GLVRTGLLFG FMNAAVAVWA LWLFRHELRR FGAHALACAL VLAALLAGLL GAEHITRFAE
DKFYQDRIVL SSASPYQRIV VTHGRAGHRL YLNGNLQFAE RDEYRYHEAL VHPVMAAHGH
PKRVAVLGGG DGMAVREVLK YPSVESVTLV ELDPAMTQLF GSHPTLRQLN GDALASRKLT
IVNTDAFQWL QQGDDTYDVI VVDFPDPTNF AIGKLYTNSF YALLDQRLAA SGYAVVQTTS
PLVARRSFWT VVTTIESVGL QARPYHAHVP SFGEWGFVIA SRRPWRVPAE LPAGLRFLDA
AALPLLFDFP RDMARVPAEV NRLSNQVLVH TYEQEWGQVA H
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