Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4089 |
Symbol | |
ID | 4674431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4365743 |
End bp | 4366726 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639841130 |
Product | ApbE family lipoprotein |
Protein accession | YP_988269 |
Protein GI | 121596373 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.224372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA CCTGTTCTGA CCCGCGGCGG CTGGCGCTGC ATGGCCCCAC CATGGGCACG CGCTGGTCGG TTACCTGCGA TGCGGCGCCG GACACCGATG TGCAGGCGCT GCAAACCGCG CTGGCCGCCG CCGTGCAACT CGTGGATGCG CAGATGTCGC CCTGGCTGCC GGGCAGCGAT CTCAACCGCT TGAACCACGC CCCCGTGGGG GCCTGGGTCA CGCTGCCCGC TGAAATCCTG GAAGTATTGG TCTGCGCGCT GGACGTCTGC CGCCTGAGTG CGTGCGCCTT CGACCCGGCT GCGGGTGCGC TGGTCGATGC CTGGGGCTTT GGAGCGGTGC GCGACGCTCC CGACGCCGAG GCGATCCGCA CAGCCACCAG CGCGGCACCT GTCGCGCGCA CCCCCACGTA CGAGGCGCTG GAGCTGGACA GCGGCATGCT GCGCGCCCGC AAGCACGCAC CCGTGCACCT GGACCTGTGC GGGATCGCCA AGGGCTACGC CGTGGACCGC ATGGCCGACG TGCTGCGGCA GAACGGCGTG CCGCACGCCC TGGTGGCGCT GGACGGCGAG CTGCGCGCCG TGGGCGGCCA GGCCGATGGC CAACCCTGGG CCGTCGCGGT GGAAAGCCCC GAGACCGGCC GCCGCGCCGT GCACAGCGTG GTCGAACTGC AGGACCTGGC TGTGGCGACC TCGGGCGACT ACCGGCACTA TCTCCAGGTA GGCGACGCAC GGCTGGCGCA CACCATGGAC ACGCGCCGTG GCGCCCCCGT GCGCAACGAA GTCGCCTCTG TCACCGTGTT GGCACGCCAG TGCATGCACG CCGACGCCTG GGCCACCGCG CTGCTGGTGG CCGGCCCTGG CGAAGGGCTG GCGCTGGCCC AGCGCATGGG GCTGGAGGCG CTGTGGATGC TGAGGCGCGG CAACGGACTG GTCACGCTGG GGCTGGGCCG GTTCGGCTCG GGCGCACCGG CGAGCGGGGT ATGA
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Protein sequence | MPKTCSDPRR LALHGPTMGT RWSVTCDAAP DTDVQALQTA LAAAVQLVDA QMSPWLPGSD LNRLNHAPVG AWVTLPAEIL EVLVCALDVC RLSACAFDPA AGALVDAWGF GAVRDAPDAE AIRTATSAAP VARTPTYEAL ELDSGMLRAR KHAPVHLDLC GIAKGYAVDR MADVLRQNGV PHALVALDGE LRAVGGQADG QPWAVAVESP ETGRRAVHSV VELQDLAVAT SGDYRHYLQV GDARLAHTMD TRRGAPVRNE VASVTVLARQ CMHADAWATA LLVAGPGEGL ALAQRMGLEA LWMLRRGNGL VTLGLGRFGS GAPASGV
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