Gene Ajs_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4084 
Symbol 
ID4670575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4360753 
End bp4361082 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content67% 
IMG OID639841125 
Productmembrane protein 
Protein accessionYP_988264 
Protein GI121596368 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.187965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TGCGCCGCCC CTTCGTCCTG ATGGCCCTTG CGGTGGCCGC CGCCACCGCG 
GGCACTGCCG CGCAGGCCGC CGAGCGCGGC CATGGCGACC ATGACCTGGC GCGCCAGGCG
CTGGAGCGCG GCCAGGTGCT GCCGCTGCGT ACCGTACTCG AGAAGGTCGA GCGCGAGTAC
CAGGGCCAGG TGCTCAAGGT GGAGTTCGAG CATGATGACG GTCGCTTCAT CTACGAGATC
CGCCTGCTGC AGCAAGACGG CCGCATGGCC AAGCTGAAGA TCGACGCGGT CGATGGACGT
GTGCTGCAGA TCAAACGCAA GGAACATTGA
 
Protein sequence
MNALRRPFVL MALAVAAATA GTAAQAAERG HGDHDLARQA LERGQVLPLR TVLEKVEREY 
QGQVLKVEFE HDDGRFIYEI RLLQQDGRMA KLKIDAVDGR VLQIKRKEH