Gene Ajs_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4080 
Symbol 
ID4674127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4353879 
End bp4355072 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID639841121 
Producthypothetical protein 
Protein accessionYP_988260 
Protein GI121596364 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.827014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGGC AACCCAGGCA TAAGGAGAGC GCAGTGCTGA TTTCAAGACT CCAACTGCAA 
AACTGGCGCA ACTTCAAAAA AATCGAGGTG GATTTGCGCG ACCGGGTGTT CGTGATTGGG
CCGAACGCCT CGGGCAAGTC CAACCTGCTG GATGTGTTCC GGTTTTTGCG CGATGTGGCC
AAACCCAAGG GTGGGGGGCT GCAGCGCGCC GTGGAAATGC GCGGCGGCAT GACCAAGGTG
CGCTGCCTGC TGGCGCGCAG CAACCCGGAG GTGCTGATCG AGGTCGATCT GGCAGAAAAA
ATAGATACCC CGGCCATCTG GCGCTACTGC CTGGCCTTTC GCAGCGAGGG CAAAGGCAAG
CAGCGGGTGG TGGTAAGCAA GGAGCGGGTG GAAGACTTGC GCACGGGCGC CGTGCTGCTC
GACCGGCCCC ACAACCCGGA AGACCAGGCA GACCGTGAGC GTTTGACGGA AACCAGCCTG
GAGCAGGTCA ACGCGAACAA GGATTTTCGG GACATTGCGC AGTTTTTTGG CGCACTGACT
TATCTGCATC TGGTGCCGCA ATTGCTCAAA CATGCGGAGC TGGGCGCCAG CGTCTTGCTG
GAAGGTGACC CTTTTGGCCA GTCGTTTCTG GAGCGCATTG CCAAAACCCC GGACCGCACC
CGCGATGCAC GTCTGAAAAA AATCGAATCG GCCCTGCGGG CCTGTGTGCC CAATATGCGC
GACCTGAAAT TCAGCCGCGA CAACGCCACG GGCACGCCCC ACCTGGAAGC GCTCTACGAG
CATTGGCGGC CCGATGCGGG CTGGCAGCGT GAAGACCAGT TCTCTGATGG CACGCTGCGC
CTGCTGGGCA TCATGTGGAG CCTGCTCGAT GGCGACTCTT TGCTGCTGCT GGAGGAGCCG
GAGTTGTCGC TGAACGAGTC GATTGTTCGG CAGATTCCGC CCTTGCTGTG GCAGATGCAG
CGCCGGGCAA AGCACCGCCG CCAGGTGTTT GTGACCACCC ACAGCGAGGC CCTGCTGGAG
CACAGCAGCG TGGACCCGCG CGATGTGCTG CGGCTGGAGC CTTCGGCCGA AGGCACACGC
GTTGTGCCTG CCACAGCCCA GGAGCTGGAG TTGGTTGCGG CGGGCTACAA CGTGGCCGAG
GCCATGGTTC GCAAGGCCCC GCCAAGCCAG ATTGAACAGC TTTCCATTTT TTAG
 
Protein sequence
MLRQPRHKES AVLISRLQLQ NWRNFKKIEV DLRDRVFVIG PNASGKSNLL DVFRFLRDVA 
KPKGGGLQRA VEMRGGMTKV RCLLARSNPE VLIEVDLAEK IDTPAIWRYC LAFRSEGKGK
QRVVVSKERV EDLRTGAVLL DRPHNPEDQA DRERLTETSL EQVNANKDFR DIAQFFGALT
YLHLVPQLLK HAELGASVLL EGDPFGQSFL ERIAKTPDRT RDARLKKIES ALRACVPNMR
DLKFSRDNAT GTPHLEALYE HWRPDAGWQR EDQFSDGTLR LLGIMWSLLD GDSLLLLEEP
ELSLNESIVR QIPPLLWQMQ RRAKHRRQVF VTTHSEALLE HSSVDPRDVL RLEPSAEGTR
VVPATAQELE LVAAGYNVAE AMVRKAPPSQ IEQLSIF