Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4075 |
Symbol | |
ID | 4673889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4346823 |
End bp | 4349000 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639841116 |
Product | TonB-dependent copper receptor |
Protein accession | YP_988255 |
Protein GI | 121596359 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGG CGCCTTCCGT TGTTTGCCTG CGCGCTGATC TGCCGCCCCC GCGGCCGAGC AGCGCCGGGC GTGGATTTCT CATGACTGCA TATTCCTTCC GCGCGCCTGC CTTGCGGTGC GCACCCCTGT CCTCGCACCT CACCCCCTGC GCGCTGGCCT GCGCGCTGCT GCTGGCAGGC CCGGCCCTGG CCGCGAGCGA CGCCGTGAAC AACGCGGCCG CGGCCCCCGA GCACACGCTG CGCGACGTGG TCGTCACGGC CGTGCACGAC CACTCGCCCG TGCAGGTGGT GGCCGACCCC AAGCAGCCGC GCCAGCCCGT GCCGGCCAGC GACGCGGCCG ACTACCTCAA GACCATCCCG GGCTTCTCGG CCATCCGCAG CGGTGGCTCC AACGGCGACC CGGTGTTCCG CGGCCAGTTC GGCTCGCGCC TGCCGCTGCT GACCAACGGC ACGCAGCTGC TGGGCGCCTG CCCGGGGCGC ATGGACGCGC CCAGCTCCTA CATCTCGCCC GAGACCTACG ACACGCTCAC CGTCGTCAAG GGGCCGCAGA CCGTCGTCTG GGGGCCGGGC ACCTCGGCCG GCGTGGTGCG CTTTGACCGC GAGCGCCCTG ACTTCACCGA ACCCGGCGTG CGCCTCAGCG CCAGCCTGCT GGGCGCCAGC GCCGGGCGCA ACGACCAGAA CGTGGACTTT CAGGCCGGCA ACGCGCAGGT GTACGTGCGC GTGACCGCCA ACCATTCCCA CGGCCAGGAC TACAAGGACG GCGACGGCCG GCGCGTGCCC TCGGCCTGGG ACAAATGGAA CACCGACGTG GCGCTGGGCT TCACGCCCGA CGCCGACACG CTGCTGGAGC TGAGCGCCGG CACGGGCGAC GGCGAGGCGC GCTACGGCGG GCGCGGCATG GACGGTACGC AGTTCAAGCG CGAGAGCTGG GGCCTGCGCT TCGAGAAGCG CCACCTCACG CCCTGGCTGG CCAAGCTGCA GGCACAGGTC TACGGCAATC GCGCCGACCA CGTGATGGAC AACTTCACGC TGCGCACCTT CCAGCCCGGC GGCAGCATGT CCATGCCCAT GGCCAGCAAC GTGCGGCGCA CCACTGAGGG CGCGCGCGTG GCCGCCACGC TGCAGTGGCA GCCCGACTGG CAGTTGGAGA CGGGCCTGGA CGCACAGCGC AGCCCGCACG ACAAGCGCAG CGGCACGCCC AGCGTGCCCT ACGACAGCAA GCCCTGGATG CGCGACGCCA AGTTCGAGAA CCTGGGCGCA TTCGCCGAAC TGTCATGGCA GGCCCAGGCC GACACGCGCT GGGTGGGCGG CCTGCGCCTG GACCGCGCCG AGGCCTGGCG CTACCCTGCC CCGAGCGGCA TGGGCGGCAT GGCCCCGGCG GCCGGCGCGG ACCACCGCAC GCGCTCGGCC ATGCCCAGCG GCTTCGTGCG CTGGGAACGC ACGCTGGCGC CGCAGGGCGC GCTGGTCTAC GCGGGCCTGG GGCACGTGCA GCGCTTTCCG GACTACTGGG AGTTGATCTC CCCCGGCAAC AGCGCGGCCA GCGCCGGCAA CGCCTTCGCC ACGCTGCGCC CCGAGAAGAC CACGCAGCTG GACATGGGCG CGCAGTGGAA GGGCGCGGAC TGGCAGCTGT GGACCTCGGC CTATGTGGGC GTGGTGCGCG ACTACATCCT GTTCGACTAC ACCGGCATGA AATCGGCCGT GCGCAACGTC GACGCCCGCA CCGCCGGGCT GGAGCTGGGC GCCAGCCAGC GCCTGGGCAC GGCGTGGACG GCGCAGGGCA CGCTGGCCTA CAGCTGGGGC CGCAACACCA GTGAAGGCCG CCCGCTGCCG CAGATGCCGC CGCTGGAGGC GCGCCTGGGC CTGGAATACG CCCAGGGCCC GTGGAGCGCC GGCGGCCTGT GGCGCCTGGT GGCCGCGCAG CACCGCCATG CCAACGGCCA GGGCAACGTG GTGGGCCGCG ACCTGGGCGC GAGCGCCGGC TTCGGCGTGC TGTCGCTGCA CGCGGGCTAC CGCATCAACG CGCAGCTGAA GCTTGCCGCA GGGGTGGACA ACCTGCTGGA CAAGAACTAC GCCGAGCACC TGAACCTGGC GGGCAACGCC GGCTTCGGCT ACCCGGGCGG CGTGCGCATC AACGAACCCG GCCGCACGCT GTGGCTGCGC GCGGACCTGC AGTTCTAG
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Protein sequence | MGLAPSVVCL RADLPPPRPS SAGRGFLMTA YSFRAPALRC APLSSHLTPC ALACALLLAG PALAASDAVN NAAAAPEHTL RDVVVTAVHD HSPVQVVADP KQPRQPVPAS DAADYLKTIP GFSAIRSGGS NGDPVFRGQF GSRLPLLTNG TQLLGACPGR MDAPSSYISP ETYDTLTVVK GPQTVVWGPG TSAGVVRFDR ERPDFTEPGV RLSASLLGAS AGRNDQNVDF QAGNAQVYVR VTANHSHGQD YKDGDGRRVP SAWDKWNTDV ALGFTPDADT LLELSAGTGD GEARYGGRGM DGTQFKRESW GLRFEKRHLT PWLAKLQAQV YGNRADHVMD NFTLRTFQPG GSMSMPMASN VRRTTEGARV AATLQWQPDW QLETGLDAQR SPHDKRSGTP SVPYDSKPWM RDAKFENLGA FAELSWQAQA DTRWVGGLRL DRAEAWRYPA PSGMGGMAPA AGADHRTRSA MPSGFVRWER TLAPQGALVY AGLGHVQRFP DYWELISPGN SAASAGNAFA TLRPEKTTQL DMGAQWKGAD WQLWTSAYVG VVRDYILFDY TGMKSAVRNV DARTAGLELG ASQRLGTAWT AQGTLAYSWG RNTSEGRPLP QMPPLEARLG LEYAQGPWSA GGLWRLVAAQ HRHANGQGNV VGRDLGASAG FGVLSLHAGY RINAQLKLAA GVDNLLDKNY AEHLNLAGNA GFGYPGGVRI NEPGRTLWLR ADLQF
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