| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4067 |
|---|
| Symbol | |
|---|
| ID | 4673797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4336180 |
|---|
| End bp | 4337841 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639841108 |
|---|
| Product | L-lactate transport |
|---|
| Protein accession | YP_988247 |
|---|
| Protein GI | 121596351 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1620] L-lactate permease |
|---|
| TIGRFAM ID | [TIGR00795] L-lactate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGGC AACAAATCTA CGACCCACTG GGCAATATGG TCATCTCCAC CGCACTGGCC
GCGCTGCCGG TGGTGGTCAT GCTCGCGGCC TTGGGCTTTT TCCACATCAA GGCGCATATC
GCGGCAGGCA TGGGCCTGAT CACGGCGCTG CTCGTGGCGG TCTTCGTCTA CGGCATGCCG
GGCGACATGG CCGGCCGTGC GGCGCTGTTC GGTGGTTTTA CCGGCCTGCT GCCCATCGGC
TGGATCGTGC TGAACATCAT CTTCCTGCAC CAGCTTACCG AGCAGAACGG CAGCTTCGCC
GTGCTGCAGG ACTCGCTGTC GGGCATCACG GAAGACCGCC GCATCCAGCT CTTGCTGATC
GCCTTCTGCT TCGGCGCGTT CTTTGAAGGC GCTGCCGGCT TCGGCACCCC CGTGGCGGTG
ACGGCGGCCA TCCTCATCGG CCTGGGCTTC TCGCCGCTGG CGGCCTCGGG CCTGTCGCTG
ATCGCCAATA CGGCGCCGGT GGCCTTTGGC GCCCTGGGCA CGCCGGTGAT CACGCTGGCC
AAGGTGCACG GCTACGACCT GATGGAAGTG ACGGCCATGA TCGGCCGCCA GCTGCCCTTC
TTCTCGCTGC TGGTGCCGTT CTGGCTGATC TGGGCCTTCG CCGGCCGCAA GGGCATGATG
GAAATCTGGC CGGCCATCCT GGTGACGGGC GTGTCCTTCG CCATTCCTCA GTTCCTGGTG
TCCAACTTCA TCGGGCCCGA ACTGGTGGAC ATCATCGCCG CCATCGTCTC CATGGTCTGC
CTGGTGGCCT TCCTGCGCGT GTGGAAGCCC AAGACGGTGT GGACGTCGCC CTCGCTGCGC
GGGCATGACC CCAGCGCCGC AGAGGCCAAG CCGCCGCAGC CGGTCAAGCG CCACAGCACC
CAGGCGCTGG TGGCCGCCTG GACCCCCTGG GTCATCCTGT CGGTGTTCGT GTTCATCTGG
GGCCTGCCCT CGGTCAAGGC CTGGCTCAAC GGCATCTTCG CGCCGGCCTT CCCCATGGCC
GGGCTGCACA ACCTGATCGA GAAGGTGCCC CCCGTGGTGC CCGCGCCGCA CAAGGAGGCC
GCTGTCTACA CACTGAACCT GCTGTCGGCC ACCGGCACGG GCATCCTGCT GTCGGCCGTG
GTGAGCGCGC TGGTCATGAA GTACAACCCC GTGGCCATCG TCACCACGTT CTTCCGCACC
TTCTGGCTGG TGCGCTACTC GCTGCTCACC ATCGTGCTGA TGTTGGCGCT GGGCACGCTC
ACGCGCTATT CGGGCACCGA CACCACGCTG GGCCTGGCTT TTGCCAACAC CGGCGTGCTG
TACCCGTTCT TCGGCACGCT CATGGGCTGG ATCGGCGTGG CGCTCACGGG ATCGGACACG
GCCTCCAACG TGCTCTTCGG CGGCATGCAG AAGGTGGCAG CCGAGCAGCT GGGCCTGTCG
CCCAACCTGA TGGGCGCAGC CAACAGCTCG GGCGGCGTGA TGGGCAAGAT GATCGACGCG
CAGTCCATCG TCGTGGCCTC CACCGCCACC CGCTGGTTCG ACCACGAGGG CGACATCCTG
CGCTACGTGT TCTTCCACTC CATCGCGCTG GCCTGCCTGG TGGGCCTGTA CGTGACGATG
CAGGCCTATG TCTGGCCGTT CTCCCTCATG GTGGTGCACT GA
|
|---|
| Protein sequence | MVWQQIYDPL GNMVISTALA ALPVVVMLAA LGFFHIKAHI AAGMGLITAL LVAVFVYGMP
GDMAGRAALF GGFTGLLPIG WIVLNIIFLH QLTEQNGSFA VLQDSLSGIT EDRRIQLLLI
AFCFGAFFEG AAGFGTPVAV TAAILIGLGF SPLAASGLSL IANTAPVAFG ALGTPVITLA
KVHGYDLMEV TAMIGRQLPF FSLLVPFWLI WAFAGRKGMM EIWPAILVTG VSFAIPQFLV
SNFIGPELVD IIAAIVSMVC LVAFLRVWKP KTVWTSPSLR GHDPSAAEAK PPQPVKRHST
QALVAAWTPW VILSVFVFIW GLPSVKAWLN GIFAPAFPMA GLHNLIEKVP PVVPAPHKEA
AVYTLNLLSA TGTGILLSAV VSALVMKYNP VAIVTTFFRT FWLVRYSLLT IVLMLALGTL
TRYSGTDTTL GLAFANTGVL YPFFGTLMGW IGVALTGSDT ASNVLFGGMQ KVAAEQLGLS
PNLMGAANSS GGVMGKMIDA QSIVVASTAT RWFDHEGDIL RYVFFHSIAL ACLVGLYVTM
QAYVWPFSLM VVH
|
|---|
| |