| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4065 |
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| Symbol | |
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| ID | 4673780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4334211 |
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| End bp | 4335392 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639841106 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_988245 |
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| Protein GI | 121596349 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA TGGAGCGCCG CGCCAGCGTC AGCCTGGCGC TGATCTTCGC GCTGCGCATG
CTGGGCCTGT TCCTAGTGCT GCCGGTCTTT GCCCTCGAAG CCCGCAAGTA CCCGGGCGGC
GACGACCCCG CCCTTGTGGG GCTGGCCATG GGGATCTACG GGCTCACGCA GGCGGTGCTG
CAGCTGCCGC TGGGCATGGC GTCGGACCGC TTCGGGCGCA AGCGCGTCAT CGTCCTGGGG
CTGCTGGTGT TTGCCGCGGG CAGCCTGCTC GCCGCGCTGG CCGACTCGGT GATGGGGCTG
CTGGTGGGGC GCGCGCTGCA AGGTGCGGGC GCGGTGTCCG CCGCCGTCAC GGCGCTGCTG
GCCGACCAGA CACGCGACGC GGTGCGCACC AAGGCCATGG CACTGGTGGG CGCCAGCATC
GGGCTGATGT TCGCCATCGC CCTGGTGGCG GCGCCGCTGC TGGCCGCGCA CATCGGCCTG
GCCGGCCTCT TCGGCCTGAC CTGCGCGCTG GCGCTGGGCG GCGTGGCCGT GGTGCTGTGG
ATGGTGCCGC CCGAGCCGGT GCAGCATGCC GACGCACCGC GCGGGCGCCT GGCCGACGTG
TGGCGCCATG CCGACCTGCT GCGCCTGAAC CTGGGCGTGT TCGTGCTGCA CACGGTGCAG
ATGGCCATGT GGGTGGCCGT GCCGGCCCTG CTGGTGCAGG CCGGCTTGCC CAAGGACGCG
CACTGGCAGG TGTACCTGCC GGCCGTGGTG CTGTCCTTCG TCGCCATGGG CGGGCTGTTT
GCCATGGAGC GGCGCGGACG GCTGCGCGCG GCGCTGCTGG TCGCCATTGG ACTGGTGCTG
GTGGTGCAGA TGGGCTTTGG CCTGCTGGCG GCCGGAGGCG CTGCGCCATC GCTGATGCCG
GTGGCGGCGC TGCTGTTCAT CTTCTTCTGC GGCTTCAACG CGCTGGAGGC CACGCAGCCC
AGCCTGGTGT CGCGCATGGC GCCGGCCAAC CTGCGCGGCG CGGCGCTGGG CGCCTACAAC
ACGCTGCAGT CGCTGGGCCT GTTCGCGGGC GGTGCGCTGG GCGGCGCGCT GGCGAAGTGG
GCGGGCGCGC CGGGATTGTT CACCGCCACC GCCGTGCTCA CGGCCCTGTG GTTGCTCATC
ACCTGGCCGC TGCGGCCGGT GGGACGCGGC GGCGGCCACT GA
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| Protein sequence | MTPMERRASV SLALIFALRM LGLFLVLPVF ALEARKYPGG DDPALVGLAM GIYGLTQAVL
QLPLGMASDR FGRKRVIVLG LLVFAAGSLL AALADSVMGL LVGRALQGAG AVSAAVTALL
ADQTRDAVRT KAMALVGASI GLMFAIALVA APLLAAHIGL AGLFGLTCAL ALGGVAVVLW
MVPPEPVQHA DAPRGRLADV WRHADLLRLN LGVFVLHTVQ MAMWVAVPAL LVQAGLPKDA
HWQVYLPAVV LSFVAMGGLF AMERRGRLRA ALLVAIGLVL VVQMGFGLLA AGGAAPSLMP
VAALLFIFFC GFNALEATQP SLVSRMAPAN LRGAALGAYN TLQSLGLFAG GALGGALAKW
AGAPGLFTAT AVLTALWLLI TWPLRPVGRG GGH
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