Gene Ajs_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4060 
Symbol 
ID4673699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4324524 
End bp4325528 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID639841101 
Producthypothetical protein 
Protein accessionYP_988240 
Protein GI121596344 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.354383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG CCATGCACAC TTCCCGCACC CCCGCCCCGT TGCGCCGCGC GCTGCTGGCC 
AGCGCCGCGC TGCTCGCCGC TGCCAGCCCT GCCGCTTTCG CGCAAGCGCC CGCCTACCCC
AGCAAGCCCA TCACCATCGT CGTGGGCTAT CCGCCCGGCG GCAGTACCGA CCTGACCGGC
CGCGCCGTGG GCGCGGAGCT GTCCAACCGC CTGGGCGTGC CCGTGGTGAT CGAGAACCTG
GGCGGCGCGG GTGGCGCCAT TGGCGCGCAG AAGGTGGCCA GCAGCGCGCC CGACGGCTAC
ACGCTGCTGG TCGGCGCCAG CAACGAGATC GCCATCAACA AGCTGGTGAC CAAGAAGGTC
AAGTACGACA TCAAGGACTT CACCGCCATC GGCCTCGTGG CCTCGCAGCC CCTGGTGCTG
GTGGCCAGCA CCGGCACCGG CGTGAAGAAC CTGGCCGAAT TCACCGAACG CGTGCGCAAG
AACCCCGGCA AGCTCAGCTA TGGCAGCTCG GGCGTGGGCA CCTCGCTGCA CCTGGCCGGC
GAGATGATCA AGGAACAGGG CCAGCTGTTC ATGACGCACA TCCCCTACCG CGGCGTGGCG
CCGCTCACCA ACGACCTGGT GGGCAACAAC CTGGAGTTCG GCGTGTTCGT GCTCTCCAGC
GGCCTGCCGC ACATCAAGAG CGGCAAAGTG ATCGCCCTGG GCACCACCGA GGCCAAGCGC
TCGACCGTCG CGCCCGACAT TCCGGCGCTG GCCGAATCGG CGCAGTACAA GAACGTGGAC
ATCGGCACCT GGTTCGCCCT CATGGCGCCT GCCCACCTGC CCAAGCCCGT GGCCGAGCGG
CTCAAGAAGG CGCTCAACGA GACGCTGGAG TCGCCGGACT TCCGCAAGCG AATGGAAGCC
GCGGGTTCCA CCGTGGCATC CCCCAGCCTG GACGTGGACA AGTTCCTCGC CGCAGAGGTC
GCCAAGTACA AGAAGATCAT CGAGTTCGCC AAGATCGAAG AATGA
 
Protein sequence
MENAMHTSRT PAPLRRALLA SAALLAAASP AAFAQAPAYP SKPITIVVGY PPGGSTDLTG 
RAVGAELSNR LGVPVVIENL GGAGGAIGAQ KVASSAPDGY TLLVGASNEI AINKLVTKKV
KYDIKDFTAI GLVASQPLVL VASTGTGVKN LAEFTERVRK NPGKLSYGSS GVGTSLHLAG
EMIKEQGQLF MTHIPYRGVA PLTNDLVGNN LEFGVFVLSS GLPHIKSGKV IALGTTEAKR
STVAPDIPAL AESAQYKNVD IGTWFALMAP AHLPKPVAER LKKALNETLE SPDFRKRMEA
AGSTVASPSL DVDKFLAAEV AKYKKIIEFA KIEE